Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00747 ATGTTTCTTATGACTTTTTGTAATCACTTGCAGGAAGATGATAGCGACATCAAGCGAGTTCAACTATTGAAAGAGGATGTGCGGAGGATGATTGTCTCTCCGGTTGATGACACTTTCCTTCTTAAATTAAACTTCATTAACTCAGTCCAACGTTTGGGTGTTTCTTACCATTTTGAACACGAAATCGATGAAGCACTGCATCAAATTTATGAGAATGCAACGAAGGACAATAACATCGTAGGTCACGATGATGATCTTCATCATCTGGCTTTACTCTTTCGGCTGCTTAGACAACATGGATATCGTATTTCGTCAGATGTATTTCACAAATTCAAGGACCAAACTGGAAACTTTAAGGAAAGCATTGTGAATGATGTACAAGGAATGTTGAGCTTGTATGAAGCAGCCCAATTAAGAATCCATGGAGAAGAGATACTGGAAGAAGCATATAGTTTTACTCTCATTCAGTTAACTCGGTCATTAACCACCAAATTAAGCCCCTTTCTTTCTGGGTTAGTGCACCATAGCTTAGAACAATCACTTCGCAGGGGAATGCCAAGGTTGGAGGCAAAATATTATATATCTTTCTACCAAGAGGATCCCTCACATGATGAAAGTTTGTTAACCTTAGCAAAACTAGATTTTAATATGTTACAGAAGCTACATCAAAAAGAAGTCAGCAATGCGACCAAGTGGTGGATTAAAGATTTGAATGTATCAAAAAACTTTCCTTTTGCACGAGATAGGATTGTGGAAGCATGCTTCTGGATTTTAGGAGTGTACTATGAGCCACAATATTGTCTTGGTAGAAGGATAATGATGAAAGTATTTGGCGTATTATCCATCATTGATGATATGTATGATGCCTATGGAACCATTGATGAGCTGAAGATTTTCACCAATGCAATAGAGAGGTGGGATATCTCCTCATTGGTTGATCTCCCAGACTATATGAAATTATGTTATATCGCACTTTTGGATGCTTTTGAACAAATACGACAGGAGTTGAGAAAGCAAGGAAAAGAGGATTTCGTCAAGTATGCTGAAAAACAATTGAAAAGACTAGTCCAAACATATCTTACTGAGGCAACATGGCTTCATAACAACCACACACCGACAGTGGAGGAATACATGGAAGTTGCGATTATATCATGTGGTTATGTTATATTGACAACTTTATCTTTCTTGGGCATGGAAGACACAACAGAGGAGGCCCTCATATGGGCAATGAGAGACCCAAAAGTTATTATAGCTTCTTCAACTCTTGGTAGGCTCATTAATGACATTACTGGAAGTGAGTTTGAGCAAGAAAGGGGACACGTTGTCTCCATCCTCGATTGCTATATGAAGCAACATAATACCTCAAGGCAAAACGCCATTAAAGAACTGCTTAAATTGGTTGAGAGTGCTTGGAAGGACGTTAATGAACAATGCCTTAATCCTACTCAACTTCCAATCACTTTTCCTGTGCGTGCTCTGAACCTTGCACGCATGATGGATGTGATTTACAAAGATGGAGATGGCTATACACATTCCGGAGGATTAATGAAGGATTACATCAAAGCTTTACTAGTTAATAAGATCCCAATATAA 1593 0.3854 MFLMTFCNHLQEDDSDIKRVQLLKEDVRRMIVSPVDDTFLLKLNFINSVQRLGVSYHFEHEIDEALHQIYENATKDNNIVGHDDDLHHLALLFRLLRQHGYRISSDVFHKFKDQTGNFKESIVNDVQGMLSLYEAAQLRIHGEEILEEAYSFTLIQLTRSLTTKLSPFLSGLVHHSLEQSLRRGMPRLEAKYYISFYQEDPSHDESLLTLAKLDFNMLQKLHQKEVSNATKWWIKDLNVSKNFPFARDRIVEACFWILGVYYEPQYCLGRRIMMKVFGVLSIIDDMYDAYGTIDELKIFTNAIERWDISSLVDLPDYMKLCYIALLDAFEQIRQELRKQGKEDFVKYAEKQLKRLVQTYLTEATWLHNNHTPTVEEYMEVAIISCGYVILTTLSFLGMEDTTEEALIWAMRDPKVIIASSTLGRLINDITGSEFEQERGHVVSILDCYMKQHNTSRQNAIKELLKLVESAWKDVNEQCLNPTQLPITFPVRALNLARMMDVIYKDGDGYTHSGGLMKDYIKALLVNKIPI 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00747 530 FunFam Isoprene synthase, chloroplastic 37 203 - -
Spst11g00747 530 Pfam Terpene synthase, N-terminal domain 10 177 IPR001906 GO:0010333|GO:0016829
Spst11g00747 530 PANTHER OS04G0344100 PROTEIN-RELATED 24 516 - -
Spst11g00747 530 SUPERFAMILY Terpenoid synthases 203 530 IPR008949 -
Spst11g00747 530 Gene3D Farnesyl Diphosphate Synthase 11 518 IPR008949 -
Spst11g00747 530 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 9 203 IPR008930 -
Spst11g00747 530 Pfam Terpene synthase family, metal binding domain 208 473 IPR005630 GO:0000287|GO:0010333|GO:0016829
Spst11g00747 530 SFLD Terpene Cyclase Like 1 C Terminal Domain 205 528 IPR034741 -
Spst11g00747 530 FunFam Isoprene synthase, chloroplastic 166 518 - -
Spst11g00747 530 Gene3D - 37 203 IPR036965 GO:0010333|GO:0016829
Spst11g00747 530 SFLD Isoprenoid Synthase Type I 205 528 - -
Spst11g00747 530 CDD Terpene_cyclase_plant_C1 2 526 IPR044814 GO:0010333|GO:0016102
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00747 Spst-Chr11 30754509 30757546 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00747 K15803 - gmx:100801358 792.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00747 11 30754509 30757546 Spst11g00747 11 30754509 30757546 ECH