Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00741 ATGTCTAAAGTAGCATCATCACTTCCTGTTTTCCCCCAGGATGCCAAACCGAACTCAAACTCCACTCGGCACACTGCAACTTTTCATCCTTCCATTTGGGGAAATTATTTCCTTTCCTATGACACCATTTCTGAAGAAGATGATAGCGACATCAAGCTTCAACTATTGAAAGAGGATGTGCGGAAGATGATTGTCTCTCCAGTTGATGACACTTTCCTTTTTAAATTAAACTTCATTAACTCAGTCCAACGTTTGGGTGTTTCTTATCATTTTGAACGCGAAATCGATGAAGCACTGCATCAAATTTATGGGATTGCAACGAAGGACAATAACATCGTAAGTCACGATGATGATCTTCATCATCTGGCTTTACTCTTTCGGTTGCTTAGACAACAAGGATATCGTATTTCGTCAGATGTATTTTGCAAATTCAAGAACGAAACTGGAAACTTTAAGGAAAGCATAGTGAATGATGTACAAGGAATGTTGAGCTTGTATGAGGCAGCCCAAATAAGAATCCATGGAGAAGAGATACTGGAAGAAGCATATAGTTTTACTCTCATTCAGTTAACTCGGTCATTAACCACAAAATTAAGCCCCTTTCTCTCTGGGTTAGTGCACCATAGCTTAGCACAGTCACTTCGCAAGGGAATGCCCAGGTTGGAGGCAAGATATTATATATCTTTCTACCAAGAAGATCCCTCACATAATGAAAGTTTGTTAATCTTTGCAAAACTAGATTTTAATATGTTACAGAAGCTCCATCAAAAAGAAGTCAGCATTGCAACCAAATGGTGGGTTAAAGATTTGAACGTGTCAACAAACTTTCCATTTGTACGAGATAGGATTGTGGAAGGATGCTTCTGGATTATAGGAGTGTACTATGAGCCGCAATACTGTCTTGCCAGAAGGATAATGATGAAAGTAATGGCCATATCATCCATTATTGATGATGTGTATGATTCTTATGGAACCATTGACGAGTTGAAGATTTTCACCAATGCAATAGAGAGGTGGGATATCTCCTCGTTGGTTAATCTCCCAGAATATATGAAGTTATGTTATGTGGCACTTTTGGATGTTTTTGAAGAAATACAGCTTGAGCTGAGAAAGGAAGGAAAAGAATACTTCGTCAAGTATGCTGAAAAACAAATAAAGAGACTAGTCCAAGCATATCTTATTGAGGCAACATGGTTTCATTACAACCACACACCGACAGTGGAGGAGTACATGGAAGTTGCAACTATGTCGTGTGGTTATGCTATGTTGACAGCTGTATCTTTCTTGGGCATGAAAGACACAACAGAGGAGGCCCTCATATGGGCAACGAGTAACCCTAAATTTATTGTAGCTGCTTCAACTATTTGTAGGTTCATGGATGACATTGCTGGAAGTGAGTTTGAGCAAGAAAGAGGACACGTTGTCTCAAGCCTTGATTGCTATATGAAGCAACACAATACCTCAAGGCAAAACGCCATTAAAGAACTGCTTAAGTTGATTGAGAGTGCTTGGAAGGACATTAATGAACAATGCCTTAATCCTACTCAACTTCCAATCGCTTTTCTTATGCGTGTTCTGAACCTTACACGCATGATGGATGTGCTTTACAAAGATGAAGATTCTTATACACATTCAGGAGGAATAATGAAGGATTACATCAAAGCTTTACTAGTTAATAACATCCCTATATAA 1692 0.3883 MSKVASSLPVFPQDAKPNSNSTRHTATFHPSIWGNYFLSYDTISEEDDSDIKLQLLKEDVRKMIVSPVDDTFLFKLNFINSVQRLGVSYHFEREIDEALHQIYGIATKDNNIVSHDDDLHHLALLFRLLRQQGYRISSDVFCKFKNETGNFKESIVNDVQGMLSLYEAAQIRIHGEEILEEAYSFTLIQLTRSLTTKLSPFLSGLVHHSLAQSLRKGMPRLEARYYISFYQEDPSHNESLLIFAKLDFNMLQKLHQKEVSIATKWWVKDLNVSTNFPFVRDRIVEGCFWIIGVYYEPQYCLARRIMMKVMAISSIIDDVYDSYGTIDELKIFTNAIERWDISSLVNLPEYMKLCYVALLDVFEEIQLELRKEGKEYFVKYAEKQIKRLVQAYLIEATWFHYNHTPTVEEYMEVATMSCGYAMLTAVSFLGMKDTTEEALIWATSNPKFIVAASTICRFMDDIAGSEFEQERGHVVSSLDCYMKQHNTSRQNAIKELLKLIESAWKDINEQCLNPTQLPIAFLMRVLNLTRMMDVLYKDEDSYTHSGGIMKDYIKALLVNNIPI 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00741 563 CDD Terpene_cyclase_plant_C1 23 559 IPR044814 GO:0010333|GO:0016102
Spst11g00741 563 FunFam Isoprene synthase, chloroplastic 199 551 - -
Spst11g00741 563 FunFam Isoprene synthase, chloroplastic 70 236 - -
Spst11g00741 563 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 29 236 IPR008930 -
Spst11g00741 563 Gene3D - 70 236 IPR036965 GO:0010333|GO:0016829
Spst11g00741 563 Pfam Terpene synthase, N-terminal domain 32 210 IPR001906 GO:0010333|GO:0016829
Spst11g00741 563 SUPERFAMILY Terpenoid synthases 236 563 IPR008949 -
Spst11g00741 563 SFLD Terpene Cyclase Like 1 C Terminal Domain 236 561 IPR034741 -
Spst11g00741 563 PANTHER OS04G0344100 PROTEIN-RELATED 21 549 - -
Spst11g00741 563 Gene3D Farnesyl Diphosphate Synthase 30 551 IPR008949 -
Spst11g00741 563 MobiDBLite consensus disorder prediction 1 23 - -
Spst11g00741 563 Pfam Terpene synthase family, metal binding domain 241 506 IPR005630 GO:0000287|GO:0010333|GO:0016829
Spst11g00741 563 SFLD Isoprenoid Synthase Type I 236 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00741 Spst-Chr11 30607924 30611542 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00741 K15803 - gmx:100801358 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00741 11 30607924 30611542 Spst11g00741 11 30607924 30611542 ECH