Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00740 ATGATTAACGCAGCCTCATCACTTCCTGCATTCGCTGAGGATGCAAAACCCATCACTCGGAACACTGCAAACTTTCATCCTTCCGTTTGGGGGGAATACTTCCTTCACAATCATCTTACTTCTGCTGCGGGGTTACAACCAGCGGAAGAAGATAATCACGTCAATGAAGCTCAACTATTGAAAGAAGGCGTGAGGAAAATGCTTGCCTCTCCTATTGATAACAATCTCTCATTTAAATTACGCTTTATCGACTCAGTTCAACGTTTGGGTGTTTCTTACCATTTCGAACACGAAATTGAGGAAGCACTGCACCAGATTCATGACATTTCAACAAAGGATGATAATATTATAACTGAAGAGGATGATCTTTGTCATGTGGCTTTACTATTTCGGTTGCTAAGACAGCAAGGATATCGCATTTTATCAAGTATTTTCTACAAATTCAAAGACCAAACCGGAAAATTCAACGAAAGGGTGGGCAGTGATATACAAGGAATGTTGAGCTTATATGAATCAGCCCAACTAAGATTTCATGGAGAGGAAATACTTGAAGAAGCACATAATTTCACTGTTATTCAGTTAACTAAGTCCCTAAATACCCAACTAAAGCCTTCTCTTGCTGCACAAGTGAAGCATAGCCTAAAACGATCACTTCGCAAAGGATTACCTAGATTGGAGGCAACATATTATATGTCTTTCTACCAAGAAGACCCTTTTCATGATGAAAACTTGCTAAAGTTTGCAAAACTAGATTTTAATATGTTGCAAGAGTTACATCAGAAAGAAGTCAGCAACGCAACCAGGTGGTGGATTGAGGATTTAAATCTCTCAGCAAACTTGCCATTTGCACGAGATAGGATTGTAGAATGTTACTTTTGGATTTTAGGGATTTACTCCGAGCCACAATATTCTGTTGCTAGAAGGATGATAACAAAAGTAATTGCTCTATGCTCTGTCATTGATGATATGTATGATGCCTATGGAACCATTGACGAGCTTCAGCTTTTTACCAATGCAATCGAGAGGTGGGATGTTTGCTGCTTAGTTGATCTTCCAGAATACATGAAAATATGTTTTACGGCAATTTTGGATGTTTTTGAAGAAATGAAGCAAGAAATGGGAGAGAAAGGAAAAGAATATCGCATCAACTATGCTAAGAAAGCAATGAAAAGTTTTGTCAAGTCTCACATGAATGAAGCAAGATGGCTTGATTGCGATCATACACCAACAATAGAGGAGTACATGCAAGTTAGAATGGTAACAAGTGGTTACCCTGCACTGATTACCATATGTTTTGCTGGCATGGAAGATATAACAGAAGAGGTCCTTCTATGGACAGCGAGGGACCCAAAAGTTATTTTAGCTTCTTCAATTATTAGTAGGATTATGGATGACATTGTTGGAGATGAGTTTGAGCAGGAGAGAGGACACATTGCTTCAAGTATTGAATGCTTTATGAAGCAGCATAATACTTCAAGAGAAAATGCCATTAGTGAACTACGTGAGATGGTTGATAGTGCTTGGAAGGATATCAATGATGCATGCTAA 1548 0.3863 MINAASSLPAFAEDAKPITRNTANFHPSVWGEYFLHNHLTSAAGLQPAEEDNHVNEAQLLKEGVRKMLASPIDNNLSFKLRFIDSVQRLGVSYHFEHEIEEALHQIHDISTKDDNIITEEDDLCHVALLFRLLRQQGYRILSSIFYKFKDQTGKFNERVGSDIQGMLSLYESAQLRFHGEEILEEAHNFTVIQLTKSLNTQLKPSLAAQVKHSLKRSLRKGLPRLEATYYMSFYQEDPFHDENLLKFAKLDFNMLQELHQKEVSNATRWWIEDLNLSANLPFARDRIVECYFWILGIYSEPQYSVARRMITKVIALCSVIDDMYDAYGTIDELQLFTNAIERWDVCCLVDLPEYMKICFTAILDVFEEMKQEMGEKGKEYRINYAKKAMKSFVKSHMNEARWLDCDHTPTIEEYMQVRMVTSGYPALITICFAGMEDITEEVLLWTARDPKVILASSIISRIMDDIVGDEFEQERGHIASSIECFMKQHNTSRENAISELREMVDSAWKDINDAC 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00740 515 Pfam Terpene synthase family, metal binding domain 245 510 IPR005630 GO:0000287|GO:0010333|GO:0016829
Spst11g00740 515 Gene3D Farnesyl Diphosphate Synthase 27 515 IPR008949 -
Spst11g00740 515 FunFam Isoprene synthase, chloroplastic 208 515 - -
Spst11g00740 515 Gene3D - 74 240 IPR036965 GO:0010333|GO:0016829
Spst11g00740 515 SFLD Terpene Cyclase Like 1 C Terminal Domain 242 513 IPR034741 -
Spst11g00740 515 FunFam Isoprene synthase, chloroplastic 74 240 - -
Spst11g00740 515 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 26 238 IPR008930 -
Spst11g00740 515 SUPERFAMILY Terpenoid synthases 240 515 IPR008949 -
Spst11g00740 515 Pfam Terpene synthase, N-terminal domain 30 214 IPR001906 GO:0010333|GO:0016829
Spst11g00740 515 CDD Terpene_cyclase_plant_C1 20 512 IPR044814 GO:0010333|GO:0016102
Spst11g00740 515 PANTHER OS04G0344100 PROTEIN-RELATED 19 515 - -
Spst11g00740 515 SFLD Isoprenoid Synthase Type I 242 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00740 Spst-Chr11 30524110 30527749 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00740 K15803 - gmx:100802427 769.615