Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00738 ATGAGTGGAGCACGAGAAGAAGGGGAGAAACTAGTTGCTCAAGGAGGGCACGCTGCGCAATATAGCGTCGTGCAAGGACGTGAGATTCGTCCACGTGGCGGAACGAGAGGAGCCTGGTATGGTTTGAGGGAAGTTGATGGTCACATCAAACAAGTTCAAGTATTAAAAGAAGGCGTAAGGAAGATGCTTGTTTCTCCTATTGATAACAATTTCTCTTCGAAATTGAACTTCATTGACACAGTTCAACGCTTGGGTGTTTCCTACCATTTTGAACAAGAAATTGAGGAAGCATTGCTCCAGATTTACAACGTTTCAACAAAAAACAATGATATCATAACCTGCGATGATGATCTTCATCAGGTGGCTTTACTCTTTCGATTGCTTAGACAAAACGGGTACCGTGTTTCATCAAGTGTATTTTACAAATTCAAAGACCAAAGTGAAAAGTTCAATGAAAGGGTAGCTACTGATATACAAGGAATGTTGAGCTTGTATGAGGCAGCTGAACTAAGATTTCATGGAGAACAGATACTTGAAGAAGCACACAATTTTACTTCTATTCAGTTAAATAAGTTTGTAATTTCCCAATTTAATCCTTCTTTTGCTGCAAAAGTGAAGCATAGCTTATTCCGATCACTTCGCAAGAGATTGCCTAGGCTGGATGCAGTAAATTATATGGCTTTCTACCAAGAAGATCTTATACACGATGAAAATTTGCTTACATTTGCAAAATTAGATTTTAACATGTTGCAGGAGATACATAAAAAAGAAGTTCATGATCTCAGCAGGTGGTGGACACAGGAATTAAATGTCTCAACAAAGTTGCCATTTACACGAGATAGGATTGTAGAATGTTACTTTTGGATTCTAGGAGTGTACTTTGAGCCTCGATATTATACGGCTAGAAGGTTGACAGCCAAAACAATCGCAATATGTTCCATCATCGACGACATGTATGATGCCTATGGAACCATTGACGAGCTTGAACTTTTTACAAATGCAATTCAGAGGTGGGATATTTGCTGTTTGGTTGATCTCCCAGAATACATGAAATTATGTTACAGGGCGATTATGAATGTTCTTGAAGAAATAGAGAACGAGACCACCAAACAAGGAAAACCATACTGCATCAAGTATGCTAAGAAAGAAATGGAAAGACTAGTGAAGGCTCAGTTGGCTGAAGCAAGATGGTGTCATTGCAACCACATTCCAACAACGGAGGAGTACATGCAAGTAAGAAAAATATCTAGTGCTTACTCTTTGCTGATTACCACATCTTTCTTTGGCATGGAAGATACAACAGAGGAGGTACTTATGTGGGCAACAAGTGACCCAATAATTGTTACAGCTTCTACAGTTATATGTAGACTCTTGGATGACATTGTTGGAGATGAGTTTGAGCAACAGAGAAAACACGTTGCTTCAAGCATCCAATGTTATATGAAGCAACATAAAACCTCAAGGGAATGTGCTGTTGAAGAACTACACAAGATGGTTGAGAATGCTTGGAAGGACATAAATGATGCATGTCTGGCTCCTACTCAACGTATTGTCAACTATGCACGAGTGATCGATGAGCTTTACAAAGATGAAGATAACTATACAGATGCAGGAGGGATATTGAAGGATCATATTGAAGCTTTACTAGTTAATAAAATGATATCTAAGCTAAAAGCTTAG 1680 0.3881 MSGAREEGEKLVAQGGHAAQYSVVQGREIRPRGGTRGAWYGLREVDGHIKQVQVLKEGVRKMLVSPIDNNFSSKLNFIDTVQRLGVSYHFEQEIEEALLQIYNVSTKNNDIITCDDDLHQVALLFRLLRQNGYRVSSSVFYKFKDQSEKFNERVATDIQGMLSLYEAAELRFHGEQILEEAHNFTSIQLNKFVISQFNPSFAAKVKHSLFRSLRKRLPRLDAVNYMAFYQEDLIHDENLLTFAKLDFNMLQEIHKKEVHDLSRWWTQELNVSTKLPFTRDRIVECYFWILGVYFEPRYYTARRLTAKTIAICSIIDDMYDAYGTIDELELFTNAIQRWDICCLVDLPEYMKLCYRAIMNVLEEIENETTKQGKPYCIKYAKKEMERLVKAQLAEARWCHCNHIPTTEEYMQVRKISSAYSLLITTSFFGMEDTTEEVLMWATSDPIIVTASTVICRLLDDIVGDEFEQQRKHVASSIQCYMKQHKTSRECAVEELHKMVENAWKDINDACLAPTQRIVNYARVIDELYKDEDNYTDAGGILKDHIEALLVNKMISKLKA 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00738 559 FunFam Isoprene synthase, chloroplastic 211 543 - -
Spst11g00738 559 FunFam Isoprene synthase, chloroplastic 69 235 - -
Spst11g00738 559 SFLD Terpene Cyclase Like 1 C Terminal Domain 237 553 IPR034741 -
Spst11g00738 559 Gene3D Farnesyl Diphosphate Synthase 47 543 IPR008949 -
Spst11g00738 559 Gene3D - 69 235 IPR036965 GO:0010333|GO:0016829
Spst11g00738 559 PANTHER OS04G0344100 PROTEIN-RELATED 54 536 - -
Spst11g00738 559 Pfam Terpene synthase, N-terminal domain 49 209 IPR001906 GO:0010333|GO:0016829
Spst11g00738 559 SUPERFAMILY Terpenoid synthases 235 551 IPR008949 -
Spst11g00738 559 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 44 232 IPR008930 -
Spst11g00738 559 CDD Terpene_cyclase_plant_C1 44 551 IPR044814 GO:0010333|GO:0016102
Spst11g00738 559 Pfam Terpene synthase family, metal binding domain 240 505 IPR005630 GO:0000287|GO:0010333|GO:0016829
Spst11g00738 559 SFLD Isoprenoid Synthase Type I 237 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00738 Spst-Chr11 30500924 30504810 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00738 K15803 - gmx:100802427 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00738 11 30500924 30504810 Spst11g00738 11 30500924 30504810 ECH