Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00726 ATGAGGCATAGTGTTTTTTCTCTCACTCTTATCCTCATAACAATCCAACTCCTAGTGAAAGCAGAATCAATAAGCAGAGCAGATTTTCCAAAGGGGTTTATTTTTGGAACTGCTTCTTCAGCTCACCAGTTTGAGGGAGCTGTTGATGAAGGAAACAAAGGAGATAGCATATGGGATACTTTCTCTAGAATCCCAGGGAGAATTGTGGATTTCAGTAATGCAGACATGGCAGTGGATCAATACCACCGATTTGAGAATGATGTAAACTTGATGAAGGATTTGGGAATGGATTCTTACAGATTTTCCATATCATGGACGAGAATTTTCCCAAACGGAACAGGGGAACCTAATAAAGAGGGAATAACATACTACAACAACCTCATTGATGCTTTGCTTGAAAAAGGAATCCAGCCTTTTGTTACTCTATATCATTGGGACCTTCCACAAATGCTTGAAGATAAATATGAAGGATGGTTAAGCACACAGATCATAAAAGATTTTGAGCATTATGCCTATACATGCTTCAAAGCTTTTGGAGACAGAGTCAAGCACTGGATTACCTTCAATGAGCCTCATAACTTTGCACTCCATGGTTATGATTTAGGCATTCAAGCACCAGGAAGATGTTCTCTGTTAGGTCGTCTTCTATGTAAGAAGGGAAAATCATCCACTGAGCCATACGTTGTTGCTCATAACATTCTCTTATCTCATGCTGCTGCCTACAGAAGCTACCAACTAAATTTCAAGAAACAACAAGGAGGTCAAATAGGAATAGCACTAGATGTTATTTGGTATGAACCAATAACAGAACTTGATGAAGACAAAGATGCAGCAGCAAGAGCTATGGACTTCTCACTTGGATGGTTTCTAGATCCACTTTTCTTTGGAAAATATCCTCTCTCAATGAAGAAACTTGTAGGCAAGAGATTGCCAGAGATTTCTGATGCAACCTCGAAGTGGCTTGTGGGGTCTTTGGATTTTATTGGCATAAATCATTACACCTCAGTCTATACTCGTAACGATAGGACTAGGATTCATAAATTGGTTATGCAAGATGCTATTTCTGATGCTGCTGTTATTACAACCGCATACCGAAGAGGAGCTGCAATTGGAGAAAAGGCAGCTTCAAGTTGGCTGCACATTGTCCCATGGGGCATCCGAAAGTTGGTGAAACATGTGAAAGACAAATATGGGGACACACCAGTGATTATAACAGAGAATGGAATGGATGATCCAAGCAAGCCCTTTATGACCTTACAAAAGGCATTAAAAGATGACAAGAGGATAAGATACCATAGAGACTATCTCTCAAACCTATCTGCTGCTATAAGGCAAGATGATTGCAATGTACGAGGTTACTTTGTATGGTCATTGCTAGACAATTGGGAATGGAACATGGGATACACTGTACGTTTTGGACTCTACTATGTGGATTTCAAGAACAATCTTACTAGGATACCAAAAGATTCTGTGCAATGGTTCAAAAATGTGCTCAGAATAGAAACAGAAAAGAGAAAGTCAACCTATGAAAATCATACACACAAATATACTAAAGCAATTATTGACTGGGCCGGTATGTCTTCTTGCAAGTCGTCTCCAACACCGGTTGACACCAATGCTAAGATGTGTTTACATATGTATGATTCGAGGGTGGTCCATATGCAAGCTCTCAAACGTTGTTATCCGTCCTCCAAGCGTCAATCTACACTCTCTTGGTCTAGTGCAGAGGCCGAGTATAGGGGTATTGCTAATTTGGTTTTTGAGTCGTATATCATTGTGCTGTGCAGGAAAGGATCCAGATTCCTTCAGCGCCACCATTACCACACCACTATAAATCCTTCCACGGACCCAAATATTTTGTTGCTTTTTGCATATCTTTCACTTGCACTTCCAGTCTTCTTCTTCTTCTTCAAATCAAATATACCCCACAGGAACAACCCTACAAAAAGGCACACTCAATTCCTTCCCTCCCTTAGTTTTCCAAAAATAAAAAATAAAAAACTTGGGAACAGTTTCGATTGTTTCTCTGATACCCTTCAACGATTCTCGCAGCAGCATCCGCACGCAGAGTTAGTGAGTGTCGTTCTTCTTCGGTTCATTGCCCCAATGAAACGTGGGTATCAGGAATCTCCTTCGACCTCGGTAGGTCCACCTCAATCCAGAGCTAGGCATGACACTCAAGGTGATGCACACTTTCTTGAGGATGAAAGCACAAAAATTTTTGCTCGGAAAGTGGCTGATCATTACAGTGCACGATCCAACCAGACCTTGGAAGAACGGGAGGCTAGTCCAATAATTCATTTGAAGAAACTTAATAACTGGATTAAGAGCGTCTTAATTCAGCTTTATGCCCGACGAGGAGATGCAGTACTTGATCTCGCCTGTGGCAAGGTGTTAATGGGTGGTGATCTTATCAAATGGGATAAGGCCAAAATTGGATATTATGTTGGTATTGACATTGCTGAAGGTTCGATCAAAGACTGCCGAACACGCTACAACGGTGATGCTGACCATCATCAGCGACGTAAAAAGTTTACATTTCCTGCCCGCCTTATATGTGGAGATTGTTATGAGGTTCGCTTGGACAAAGTTCTTGCAGATGATGCTCCTTTTGATATTTGTAGTTGCCAGTTTGCATTGCATTACTCATGGTCTACAGAGGCCCGTGCCCGCCAAGCATTAGCTAATGTGTCAGCTTTACTTCGCCCAGGAGGCATTTTCATTGGAACTATGCCTGATGCCAATGTGATTATCAAGAAGCTTCGAGAAGCTCAAGGATTAAGTTTTGGTAACAGCGTCTATTGGGTGCGTTTTGATGAAGAATTTTCTGATAAGAAATTTAAATCTTCCAGCCCTTTTGGAATAAAGTACACATTCCATTTGGAGGATGCTGTGGATTGTCCTGAATGGATTGTCCCCTTCCACATATTCAAGTCATTAGCTGAAGAGTATGAATTTGAGCTTGTTTTCGCAAAGAACTCACACGAATTTGTGCACGATTATATGAAAAAACCGGAATTTGTGGAGCTCATGCGGAGACTAGGTGCATTGGGAGATGGCAACCAAGATCATAGTACACTCTCAGCTGATGAATGGGAGGCAGCATATCTATACATGTCATTTGTATTGAGAAAGGTTATTCCTGTAATGACACAGCGAGGTCAACCTGACAAAAGCCAACAGGGTGGCAGGAAGGATCGAGGGTCGATGCACATTTCAGAGGAAGACATCATGTTCATTACTGATTGA 3249 0.4137 MRHSVFSLTLILITIQLLVKAESISRADFPKGFIFGTASSAHQFEGAVDEGNKGDSIWDTFSRIPGRIVDFSNADMAVDQYHRFENDVNLMKDLGMDSYRFSISWTRIFPNGTGEPNKEGITYYNNLIDALLEKGIQPFVTLYHWDLPQMLEDKYEGWLSTQIIKDFEHYAYTCFKAFGDRVKHWITFNEPHNFALHGYDLGIQAPGRCSLLGRLLCKKGKSSTEPYVVAHNILLSHAAAYRSYQLNFKKQQGGQIGIALDVIWYEPITELDEDKDAAARAMDFSLGWFLDPLFFGKYPLSMKKLVGKRLPEISDATSKWLVGSLDFIGINHYTSVYTRNDRTRIHKLVMQDAISDAAVITTAYRRGAAIGEKAASSWLHIVPWGIRKLVKHVKDKYGDTPVIITENGMDDPSKPFMTLQKALKDDKRIRYHRDYLSNLSAAIRQDDCNVRGYFVWSLLDNWEWNMGYTVRFGLYYVDFKNNLTRIPKDSVQWFKNVLRIETEKRKSTYENHTHKYTKAIIDWAGMSSCKSSPTPVDTNAKMCLHMYDSRVVHMQALKRCYPSSKRQSTLSWSSAEAEYRGIANLVFESYIIVLCRKGSRFLQRHHYHTTINPSTDPNILLLFAYLSLALPVFFFFFKSNIPHRNNPTKRHTQFLPSLSFPKIKNKKLGNSFDCFSDTLQRFSQQHPHAELVSVVLLRFIAPMKRGYQESPSTSVGPPQSRARHDTQGDAHFLEDESTKIFARKVADHYSARSNQTLEEREASPIIHLKKLNNWIKSVLIQLYARRGDAVLDLACGKVLMGGDLIKWDKAKIGYYVGIDIAEGSIKDCRTRYNGDADHHQRRKKFTFPARLICGDCYEVRLDKVLADDAPFDICSCQFALHYSWSTEARARQALANVSALLRPGGIFIGTMPDANVIIKKLREAQGLSFGNSVYWVRFDEEFSDKKFKSSSPFGIKYTFHLEDAVDCPEWIVPFHIFKSLAEEYEFELVFAKNSHEFVHDYMKKPEFVELMRRLGALGDGNQDHSTLSADEWEAAYLYMSFVLRKVIPVMTQRGQPDKSQQGGRKDRGSMHISEEDIMFITD 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00726 1082 Pfam mRNA capping enzyme 735 1046 IPR004971 -
Spst11g00726 1082 Gene3D Vaccinia Virus protein VP39 761 1046 IPR029063 -
Spst11g00726 1082 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 772 1045 IPR029063 -
Spst11g00726 1082 Pfam Glycosyl hydrolase family 1 27 499 IPR001360 GO:0004553|GO:0005975
Spst11g00726 1082 CDD AdoMet_MTases 790 908 - -
Spst11g00726 1082 PANTHER GLYCOSYL HYDROLASE 28 504 IPR001360 GO:0004553|GO:0005975
Spst11g00726 1082 Gene3D Glycosidases 15 500 - -
Spst11g00726 1082 PRINTS Glycosyl hydrolase family 1 signature 471 483 IPR001360 GO:0004553|GO:0005975
Spst11g00726 1082 PRINTS Glycosyl hydrolase family 1 signature 447 464 IPR001360 GO:0004553|GO:0005975
Spst11g00726 1082 PRINTS Glycosyl hydrolase family 1 signature 324 338 IPR001360 GO:0004553|GO:0005975
Spst11g00726 1082 PRINTS Glycosyl hydrolase family 1 signature 402 410 IPR001360 GO:0004553|GO:0005975
Spst11g00726 1082 PRINTS Glycosyl hydrolase family 1 signature 425 436 IPR001360 GO:0004553|GO:0005975
Spst11g00726 1082 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 33 47 IPR033132 -
Spst11g00726 1082 SUPERFAMILY (Trans)glycosidases 17 498 IPR017853 -
Spst11g00726 1082 FunFam mRNA cap guanine-N7 methyltransferase 760 1047 - -
Spst11g00726 1082 ProSiteProfiles mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56) domain profile. 724 1052 IPR004971 -
Spst11g00726 1082 FunFam Beta-glucosidase 12 14 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00726 Spst-Chr11 30418358 30432671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00726 19 444 Glycoside Hydrolase AT5G54570 72.131 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00726 K01188 - gmx:100783543 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00726 11 30418358 30432671 Spst11g00726 11 30418358 30432671 ECH