Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00677 ATGGAACTTGATCATGGTTTCGACTTCGAGGACTGTTTCCCTTCCATGATAGCAAGGCTAGGCGCAGAAGGGTTCATTGGGGAACTCTGCAACGGGTTTCGTTTGCTCATGGATGTGAACATGGGGCTCATCACGTTTGAGAGCCTGAAGGTCAGCACCTACTTGCTTGGTTTGGAGGTGAGGGATGATGAGTTGTTGTGCATGCTCATGGAGGGTGATTTGGATGGAGATGGGGCTCTTAACCAGATGGAGTTTTGCATTCTCATGTTTAGGTTGAGTCCTTCCTTGATGGATATGCAAGGTAATGTGGATCAAGTGCATGCTAGTGTAATATAA 336 0.4702 MELDHGFDFEDCFPSMIARLGAEGFIGELCNGFRLLMDVNMGLITFESLKVSTYLLGLEVRDDELLCMLMEGDLDGDGALNQMEFCILMFRLSPSLMDMQGNVDQVHASVI 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00677 111 PANTHER CALCIUM-BINDING PROTEIN KIC 8 101 IPR044205 GO:0005509
Spst11g00677 111 ProSitePatterns EF-hand calcium-binding domain. 73 85 IPR018247 -
Spst11g00677 111 Gene3D - 7 109 - -
Spst11g00677 111 ProSiteProfiles EF-hand calcium-binding domain profile. 60 95 IPR002048 GO:0005509
Spst11g00677 111 Pfam EF-hand domain pair 42 91 IPR002048 GO:0005509
Spst11g00677 111 SUPERFAMILY EF-hand 4 89 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00677 Spst-Chr11 28989726 28990061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00677 8 98 EF-hand Containing Proteins AT4G27280 60.215 2.53e-32 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00677 K24345 - gmx:100795879 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00677 11 28989726 28990061 Spst11g00677 11 28989726 28990061 ECH