Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00674 ATGGAGTCCCCAAAGAGGAAGCCCAAGTGTCGGATGTTTCGATTGTTCCGATGTTTCAATGCCAACGGCGTCGCTTCGCCGGAACCGAAGAAAACAGACCCGCTTCTCACCTACATTGCCGTGCCGGAGAGACAAATGTTTCCGAACGTGTTCTCGTCGGCGTTCACTGCAGCCAAAGGCGGCGAGGGAGACGCGAGTCACAGGAAAAAGACGGACAGAGATAAAAATAATAGAAAAAAAAGTAACAACTTTCTTCGCCGGTCTCTCACGGCGGCTTTGAGTCACACGCCATTGGCCAAGAAGATACACAAGAGGAAAATAAACAATGATAGTTTCTCCAGAGAAAATTCAACCAATTCATCGAACATTTCTTCCTATTCTCGTAGTTCACGTGGATTCACCCCAACTTCAACATCATCACTTTCAACTTCAACCAATTTAAGCACTAGTTCAACTGGTACAATGACTTCAAGCTCATTCTGCGAACCGTGCTTAACCAGATCCTTGGCAATGAACAATGGAACTTATAGGGTGGTGAATCAGAAGCAAAATGATGGAGGCAGTAGAAGATGGTATTGTGGTTCAAACATGGCTTTGAGTGTGCTTTTGATCACTAGTATTCTGGTTTTGATTCTGTGGGGTAGGTTTTGTGCCATAGTTTACACCTCAATAGGGTTCTTTGTGGTACCTAATCGTCGCAGAAGAACTTGTGAAGAAACCGAGTTTTGTTCGGTTGGGTATAAGAAACTTTATAATGACACACTGAACCTTCAAAAAAAAAAAAAGATGCACCCTTACCAGAACCATCCCGCACTGGATTCCGACCCGCAGCTGCCGCAAATCAAAATCCACCACCCCTCCTCCCCGCGCCACCCCTCCCCCGCGGCGGCCACCCCCACGCCCACAGCCGGTGCGCGCCGCAAAATCGGCGTGGCCGTTGACCTCTCCGACGAGAGTGCCTACGCGGTGCGCTGGGCGGTGCAGCACTACATCCGCCCAGGAGACGCCGTGATCCTGCTTCACGTCAGCGCTACCAACGTCCTCTTCGGCGCCGACTGGGGCTCCATCGACCTCTCCATAAACACCGACCCGAATTCCGATGAGGAGGCCGTCAACTCCGTCAACAACAACGACCACACCAGCAAGCGCAAGCTCGAGGACGACTTCGATGCCTTCACGGCGTCGAAGGCCGCGGATCTCGCGAAACCGTTGAGGGAAATGCAGATTCCGTACAAGATCCACATCGTGAAGGACCACGACATGAAGGAGAGGCTGTGTTTGGAGGTGGAGAGGCTCGGGCTGAGCGCGGTCATCATGGGGAGCCGCGGGTTTGGTGCTGTGAGGCGCGGGAGCGATGGGAGGCTCGGGAGTGTGAGTGATTACTGTGTGCATCACTGTGTTTGTCCTGTGGTTGTTGTGCGTTATCCTGATGATGTTGCTGCGACGGCCGAGGCGGTTGTGGCGGTGAAGGAGGGGGATGAGGGTGAGGCGGTGATCCAGCCCCACAAGAAAGGTAGGGTCTTTCAGGTTCTTCATTGGTTGAGCTTGTCTTTACGGATTATGATAGGATATCCGGTAATGGTTTTGGTTGGTCCCCTTGGAGTTAGTAAGGACATTGTGGGTTCTATCATAAGCGAGGAGTTAGTGGCTGCCGTGGTTCAAGAATCGATGTGGACGGTGTTTGAAGATGAGGGTCTGATTATTGAATAA 1710 0.5164 MESPKRKPKCRMFRLFRCFNANGVASPEPKKTDPLLTYIAVPERQMFPNVFSSAFTAAKGGEGDASHRKKTDRDKNNRKKSNNFLRRSLTAALSHTPLAKKIHKRKINNDSFSRENSTNSSNISSYSRSSRGFTPTSTSSLSTSTNLSTSSTGTMTSSSFCEPCLTRSLAMNNGTYRVVNQKQNDGGSRRWYCGSNMALSVLLITSILVLILWGRFCAIVYTSIGFFVVPNRRRRTCEETEFCSVGYKKLYNDTLNLQKKKKMHPYQNHPALDSDPQLPQIKIHHPSSPRHPSPAAATPTPTAGARRKIGVAVDLSDESAYAVRWAVQHYIRPGDAVILLHVSATNVLFGADWGSIDLSINTDPNSDEEAVNSVNNNDHTSKRKLEDDFDAFTASKAADLAKPLREMQIPYKIHIVKDHDMKERLCLEVERLGLSAVIMGSRGFGAVRRGSDGRLGSVSDYCVHHCVCPVVVVRYPDDVAATAEAVVAVKEGDEGEAVIQPHKKGRVFQVLHWLSLSLRIMIGYPVMVLVGPLGVSKDIVGSIISEELVAAVVQESMWTVFEDEGLIIE 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00674 569 Gene3D HUPs 300 486 IPR014729 -
Spst11g00674 569 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 307 477 - -
Spst11g00674 569 MobiDBLite consensus disorder prediction 265 303 - -
Spst11g00674 569 MobiDBLite consensus disorder prediction 58 159 - -
Spst11g00674 569 MobiDBLite consensus disorder prediction 112 159 - -
Spst11g00674 569 CDD USP_Like 308 461 - -
Spst11g00674 569 PRINTS Universal stress protein signature 452 474 IPR006015 -
Spst11g00674 569 PRINTS Universal stress protein signature 306 324 IPR006015 -
Spst11g00674 569 MobiDBLite consensus disorder prediction 62 81 - -
Spst11g00674 569 Pfam Universal stress protein family 306 474 IPR006016 -
Spst11g00674 569 PANTHER OS01G0783500 PROTEIN 267 492 IPR044162 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00674 Spst-Chr11 28935628 28940259 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00674 - - pvu:PHAVU_011G149900g 402.905