Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00396 ATGTTCCAATATAAATGGGATATGATCTCAGGATTCTTCACCATCTCTCATTCTTCTTTCTTCCATATATTTCTTGCTCCTTTGTTGATCATCATCATGTCACTTGCTGGTAAAATCAGCATTGAAATTGGGGTTCATGCAACTGCTGCAAAGTGGTTCAACATCTTTGCAAAGCAACTCCATCAAGTTCAAAACCTTACAGATAGAGTTCATGGAACCAAGCTGCATCATGGTCAGGACTGGCACCACAAGGAGTCCATAAAAAACTGGACTTATACCATAGATGGTAAGGTTACAACATGTCAGGAGAGTATAGAATCAGTTGATGAAGCGAACAAAAGAATCACCTACAAGCTCTTTGGCGGAGATATCGGTCATAAGTATAAGGTGTTTAAGCTCACATTAGAAGCCATTGATGATCGTGGGTCTGCTATTACCAAATGGAGCATTGAATATGAGAGAATTGGTGAGGGAATTGACCCTCCATATGGCTACTTGGAATACCTGCACACCCTAAGTAGAGAGATTGATGCCAATCTTAAGGCATAG 549 0.4044 MFQYKWDMISGFFTISHSSFFHIFLAPLLIIIMSLAGKISIEIGVHATAAKWFNIFAKQLHQVQNLTDRVHGTKLHHGQDWHHKESIKNWTYTIDGKVTTCQESIESVDEANKRITYKLFGGDIGHKYKVFKLTLEAIDDRGSAITKWSIEYERIGEGIDPPYGYLEYLHTLSREIDANLKA 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00396 182 Gene3D - 33 181 IPR023393 -
Spst11g00396 182 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN 33 180 - -
Spst11g00396 182 SUPERFAMILY Bet v1-like 33 181 - -
Spst11g00396 182 SMART Bet_v_1_2 34 182 IPR000916 GO:0006952
Spst11g00396 182 Pfam Pathogenesis-related protein Bet v 1 family 35 180 IPR000916 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00396 Spst-Chr11 23721410 23722266 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00396 - - pvu:PHAVU_011G182500g 248.44