Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00319 ATGATGGCATCAACATTTCTGAAATTGAAAAATTTGAGCAGAGACGGAGCATTGAGGTGTCGGAAATGGAATCGGCAATATTCGAAATCGAGCTATGCTGCAGCAGCATCAGAGAGTGAGAAAATGGAAGAAGAAGAGGCTCCCTCTTCTGGAATCTCTAGACCGCTCTCTGAAATACTCAAAGAGCTCAACAAGAAAGTCCCTGACTCTCTCGTTAAAACCCGCCTCGAGAAAGATGGATTCCCTGTCAGATACATTCCCTGGCATCTTGTCAACCGCATTTTGAACTTACACGCTCCTGAGTGGTCTGGTGAGGTTCGGAATATCTCCTATTCCGCTGATGCCAAGTCTGTCTCCGTCGTCTACCGAGTTACCCTTTATGGGACTGATGCTGAGATATTTAGGGAATCAACTGGTACTGCTTCAGTAGACGACACAAGTTATGGAGATCCTGTACAGAAGGCAGAAGCAATGGCTTTTCGCAGAGCTTGTGCACGCCTTGGGCTGGGGCTCCACCTCTATCATGAAGATGCATCATAG 540 0.4704 MMASTFLKLKNLSRDGALRCRKWNRQYSKSSYAAAASESEKMEEEEAPSSGISRPLSEILKELNKKVPDSLVKTRLEKDGFPVRYIPWHLVNRILNLHAPEWSGEVRNISYSADAKSVSVVYRVTLYGTDAEIFRESTGTASVDDTSYGDPVQKAEAMAFRRACARLGLGLHLYHEDAS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00319 179 Gene3D DNA repair protein Rad52/59/22 54 179 IPR042525 -
Spst11g00319 179 PANTHER - 28 177 IPR037489 GO:0000724|GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00319 Spst-Chr11 10984613 10991178 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00319 K26556 - gmx:100782719 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00319 11 10984613 10991178 Spst11g00319 11 10984613 10991178 ECH