Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00309 ATGAGTTGGCTTTCCGGAACAGTATTATCGGTATGTGCATGTGCATCACTCTCCACTCCGTTGCCTCCGGCTCGCACTTTCGAACTCAATTCCAATTCCGATTCGATTTCATTTTCATGGCTTTCTTCATTTCCAACGTTATCTTGCTCGGCTAAAAACCCTCCCAAACCCTCACGCTCCCAGGATTCTTTCATTCAAGCTGCCTTCACCCGAAGATCTCGTGGAGAAGCTGCAAAGAAACCTAACAGGAAATCATGGAAGCAGAGGACAGATATGTACATGAGACCATTTTTATTAAATGTTTTCTTCTCAAAAAGATTTATTCATGCAAAAGTGGTACACCGTGGAACAAGCAAAGTCATATGTGTCGCTACCACAAACGCCAAGGATCTGCGAAATTCCCTTCCATCTTTGATAGATCATAACGCTTGTAGAGTAGTTGGAAGGCTTCTTGCTCAGCGATCAATGGAAGCTGATGTGTACGCAGTGGCCTATGAACCCAGAAAGGATGAGAGGATTGAAGGTAGACTAGGGATCGTTCTTGATACTCTTAAGGAAAATGGGATTATTTTTGTTTGA 579 0.4318 MSWLSGTVLSVCACASLSTPLPPARTFELNSNSDSISFSWLSSFPTLSCSAKNPPKPSRSQDSFIQAAFTRRSRGEAAKKPNRKSWKQRTDMYMRPFLLNVFFSKRFIHAKVVHRGTSKVICVATTNAKDLRNSLPSLIDHNACRVVGRLLAQRSMEADVYAVAYEPRKDERIEGRLGIVLDTLKENGIIFV 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00309 192 Gene3D Ribosomal protein S11 58 192 IPR036967 GO:0003735|GO:0005840|GO:0006412
Spst11g00309 192 CDD Ribosomal_L18_L5e 86 189 - -
Spst11g00309 192 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 65 191 IPR005484 GO:0003735|GO:0005840|GO:0006412
Spst11g00309 192 FunFam 50S ribosomal protein L18 74 190 - -
Spst11g00309 192 FunFam 50S ribosomal protein L18 60 192 - -
Spst11g00309 192 Pfam Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 94 191 IPR005484 GO:0003735|GO:0005840|GO:0006412
Spst11g00309 192 SUPERFAMILY Translational machinery components 93 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00309 Spst-Chr11 10896391 10897406 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00309 K02881 - gmx:100803727 307.76