Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00302 ATGGCTGAAAACGATTTAAACCCTCCTCCAGCCGCTGCACCGCCTCAGGAGCCTCCTGTACCTGCCGACTCCATTGCCAGCACCGAAGAGCTGCCTCCGTCACTCCCATCGGAGAATGATGCGAAAGCTGAGGATGTGGTTGAAGAGAAGGTAAAAGCGGAGGAGGTGGTTCTGATTGAAGAGAAAGTAAAAGGTGTCGAGGAGGCGGTTGTGGTTGAAGAGAAGGAGAAGGAGAAAGAGAAAGAGGAAGCAGAAGAGGTTATAGCCGGAGAGACGGTGGGCGAGTCGTTGAAGGAGGAGAGCAATAGGGTTTCTGATTCGGAGAGAAAGGGCGTGGAAGAGCTGAAGAAGGCGCTGAGAGAAGAGTTGGAGGAGAAGGAGGAAGGCGAGGTATCCATCTGGGGCGTCCCTCTCTTGAAGGACAACAGAACCGACGTCATTCTTCTAAAGTTTCTCAGAGCGCGGGACTTGAGAGTGAAGGACGCTCTTGTGATGATTCACAACACTCTGCGATGGAGGAAGGAGTTCGGCATCGAGGCGCTTTTGGAGGAAGATCTCGGAGAGGAGTTGGAGAAGGTGGTTTTCATGCACGGACACGGAAGAGAGGGGCACCCCGTCTGTTACAACGTCTACGGAGAGTTCCAGAACAAGGAGCTGTACCAGAAGGCCTTCTCCACCGAGGAGAACCGCACCAAGTTTCTCCGATGGCGGATTCAGCTGTTGGAACGCAGCATCAGGAACCTTGACTTCTCTCCCGGAGGCATCAACACCATTTTCCAAGTCAATGACCTCAAAAACTCTCCTGGCCCTGCAAAACGGGAACTTCGCCTTGCCACCAAACAGGCTTTGCAGTTGCTTCAGGACAACTATCCCGAATTTGTCGCCAAACAGGTTTTTATCAATGTCCCTTGGTGGTATCTTGCTTTCTATACCATGATCAATCCCTTCTTGACTCAGAGGACAAAAAGCAAATTTATCTTTGCCGGAACATCCAAGTCTCCCGACACTCTTTTCAAGTATATTTCTCCTGAGCAAGTGCCCGTTCAGTATGGGGGCCTCAGTGTCGATTTCTGTGACTGCAACCCCGATTTCACTATGTCTGATCCTGTCACCGAAATTCCTTTGAAGCCAACCACTAAGCAAACTGTCGAGATTGCTATCTATGAGAAATGCATTATTGTTTGGGAGCTGCGGGTGGTGGGCTGGGAGGTTAGCTATAATGCTGAATTCAAGCCTGATGCTAAAGATGCCTATACAGTCGTCATTCAGAAGACCACTAAGATGACCCCCACCGATGAACCAGTAGTTTCCAATAGCTTCAAAGTTGGTGAACTGGGAAAATTGTTACTCACTATTGACAATCCTACCTTGAAAAAGAAGAGGCTTCTTTACAGGTTCATGATCAAACCCTACTGTGATTGA 1422 0.4944 MAENDLNPPPAAAPPQEPPVPADSIASTEELPPSLPSENDAKAEDVVEEKVKAEEVVLIEEKVKGVEEAVVVEEKEKEKEKEEAEEVIAGETVGESLKEESNRVSDSERKGVEELKKALREELEEKEEGEVSIWGVPLLKDNRTDVILLKFLRARDLRVKDALVMIHNTLRWRKEFGIEALLEEDLGEELEKVVFMHGHGREGHPVCYNVYGEFQNKELYQKAFSTEENRTKFLRWRIQLLERSIRNLDFSPGGINTIFQVNDLKNSPGPAKRELRLATKQALQLLQDNYPEFVAKQVFINVPWWYLAFYTMINPFLTQRTKSKFIFAGTSKSPDTLFKYISPEQVPVQYGGLSVDFCDCNPDFTMSDPVTEIPLKPTTKQTVEIAIYEKCIIVWELRVVGWEVSYNAEFKPDAKDAYTVVIQKTTKMTPTDEPVVSNSFKVGELGKLLLTIDNPTLKKKRLLYRFMIKPYCD 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00302 473 SMART CRAL_TRIO_N_2 144 169 IPR011074 -
Spst11g00302 473 MobiDBLite consensus disorder prediction 1 47 - -
Spst11g00302 473 SUPERFAMILY CRAL/TRIO domain 193 362 IPR036865 -
Spst11g00302 473 Gene3D - 97 387 IPR036865 -
Spst11g00302 473 Pfam CRAL/TRIO domain 192 352 IPR001251 -
Spst11g00302 473 Coils Coil 109 132 - -
Spst11g00302 473 SMART sec14_4 188 355 IPR001251 -
Spst11g00302 473 Pfam CRAL/TRIO, N-terminal domain 114 168 IPR011074 -
Spst11g00302 473 ProSiteProfiles GOLD domain profile. 363 468 IPR009038 -
Spst11g00302 473 PANTHER PATELLIN-1 66 470 IPR044834 GO:0008289
Spst11g00302 473 FunFam SEC14 cytosolic factor family protein 187 368 - -
Spst11g00302 473 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 183 352 IPR001251 -
Spst11g00302 473 SUPERFAMILY CRAL/TRIO N-terminal domain 90 185 IPR036273 -
Spst11g00302 473 Coils Coil 63 83 - -
Spst11g00302 473 CDD SEC14 192 353 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00302 Spst-Chr11 10833885 10835581 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00302 148 347 Acyl Lipid Metabolism Gene Families AT1G55840 28.910 3.03e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00302 - - gmx:100804006 655.21