Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Spst11g00295 | ATGATCAAGCTGGTGGTAGAAGTTGTGGATGCAAGCGACCTCATGCCCAAAGATGGGGAAGGGTCAGCTAACCCCTTTGTAGAGGTAAAGTTTGATGAGCAGCAGCAAAGTACTGAGACAAAGCACAAAGAACTGAATCCTTATTGGAACGAGAAGCTAGTGTTCGACCTCGATAACCCCAGAGATCTTGCTCACAAGACAATTGAAGTGGTTGTATACAACCACAATGATCGGAACCATAACAACTTCCTTGGAAGGGTGAGACTTTCAGGCGCTTCTATCCCTCTATCGGAGTCCCAGGCCCGTGTGGAACGCTACCCACTTGAGAAACGTGGCCTCTTTTCCAACATCAGGGGAGATATTGCTCTCAAGTGTTATGCACTGCATGATCATCTTCCTTCTCATCCTCCCCCACAACCCCAAGACACCAGTAGTGATCCTCCTCCTGCTGCTGAACAGCATCACCATCACCATCACCCTCACCATCACGAGGAGGAGGATCAGGGCCCTCCCTTGCAAGAAATAAACCCCAACATGGTGGCAGACGAGGAAAGTGTGGTTGGTGACGGGGAGGAGAAGAAGAAGAAGATGAAAAAGAAAGAAAAGGAAGTGAGGACTTTTCACTCTATACCAGCTGCTGCTGCAGCAGCCAAGGCCCAGGCAGCAGTGGAAACGGTGAGGAGGGCTGACTTTGCAAAGGCTGGACCACCGAATGCGATGTTAATGCAGATCCCAAAGCAAAACCCCGATTACGGACTAGTGGAGACAACTCCACCACTGGCGGCTCGTTTGCGCTACAGAGGAGGGGACAAGATATCAACCACCTACGACTTGGTGGAACAGATGCAGTACTTGTACGTGAATGTGGTGAAGGCAAGGGATCTTCCCGTGATGGATTTCACGGGAAGCCTTGACCCTTATGTGGAAGTCAAGCTTGGTAACTACAAGGGCCTCACCAAGCACTTGGAGAAGAATCAGAACCCCGTTTGGAAGCAAATCTTTGCCTTCTCCAAGGAGAGGTTGCAATCAAATTTACTTGAAGTGACGGTGAAGGACAAGGACATTGGGAAAGATGATTTTGTGGGGAGAGTTATGTTTGATCTGACTGAAGTTCCTCTTCGGGTGCCCCCAGACAGCCCCTTGGCTCCTCAGTGGTACAGATTGGAGGACAAGAAGGGCCAGAAAGTGAACAACAATGGCGAAATCATGCTTGCAGTTTGGATGGGAACACAGGCCGATGAGTCCTTCCCGGAGGCCTGGCACTCCGACGCTCATAACGTCAGTCACTCCAACCTTGCAAATACCCGTTCAAAGGTATATTTCTCACCCAAGCTTTTCTATCTTAGAGTTCAAGTCATCGAAGCTCAGGATCTTGTTCCCTCCGATAAAGGAAGAGCCCCGGACGCTGTTGTTAGAGTACAGCTAGGGAACCGGACGAGACTCACCAGGCCTTCTCAAATGAGAAGCACCAACCCAGTTTGGAACGACGAGCTTATGTTTGTGGCTGCGGAGCCATTTGAGGATTTCATCATTGTGACTGTGGAGGACAAAGTAGGTCCTAGTGCTGAAATCTTAGGAAGGGAGATCATATCAGTGAGAAGTGTTCCACCCAGACACGAGACCAGCAAGCTCCCTGATTCTCGTTGGTTCAATTTGCACAGGCCCAGTGCGGTTGGTGAGGAAGAAACGGAGAAAAAGAAGGAGAAATTCTCAAGCAAGATTCACCTGCGAATGTGTCTGGAGGCCGGGTACCATGTGCTTGATGAGTCCACGCATTTCAGCAGTGATCTTCAGCCATCGTCCAAACATTTGAGGAAGAAAAACATTGGCATTCTCGAACTTGGTATACTGAGTGCCCGCAATTTGCTGCCCCTGAAGGCCAGGGACGGTAGGACCACCGATGCATACTGCGTGGCCAAGTATGGCAACAAATGGGTTCGAACCAGAACTCTGCTTGACACTCTCTCCCCTCGATGGAATGAGCAATATACCTGGGAGGTGTATGATCCATGCACTGTCATCACAATTGGGGTTTTTGACAATCACCACATTAATGGGAGCAATGATTCAGAAGACCAGAGAATTGGAAAGGTAAGAATCCGGTTATCAACTCTGGAAACTGATAGAGTGTATACTCATTTTTATCCTCTGCTGGTCCTTCAACCCAATGGCCTGAAGAAGAACGGAGAGCTTCACTTGGCAGTGAGATTCACATGCACGGCTTGGGTTAATATAGTAGCCCAGTATGGCAGGCCTTTGCTTCCCAAAATGCATTATGTCCAACCCATACCTGTTAGGCACATAGACTTGCTCCGCCACCAGGCCATGCAGATTGTTGCAGCTCGCCTATCTAGAGCTGAGCCACCCCTCAGGAGTGAAACGGTTGAGTATATGCTTGATGTGGATTACCATATGTGGAGTCTAAGGAGAAGCAAAGCCAATTTTCATCGAATAATGTCACTCCTCAGAGGAGTTACAGCTGTTTGCAAATGGTTTGATGACATCTGCACTTGGAGAAACCCAGTCACAACCTGCCTTGTTCACGTCTTGTTTTTGATACTGGTTTGCTACCCGGAACTGATATTGCCCACCATTTTTCTTTACTTGTTTGTAATTGGGATTTGGAATTACCGGTTCAGGCCAAGGCAGCCACCCCACATGGATCCTAGGTTGTCACAGGCAGAAACTGTCCACCCAGATGAACTGGACGAGGAATTTGACACTTTTCCATCTAGAAAGCCTTCAGATATTGTGAGAATGAGGTATGACAGATTACGGAGTGTGGCAGGGAGAGTACAGACAGTGGTTGGAGATTTGGCTACTCAAGGAGAAAGAGCTCAAGCCATACTCAATTGGAGAGACTCCAGGGCTACATCTATCTTCATCATCTTCTCACTCATATGGGCCGTATTCATTTACATTACTCCCTTCCAAGTAATCGCAATTATCGTAGGCCTATATATGCTACGTCACCCTCGGTTTAGGAGCAAGATGCCATCAGTACCGATTAATTTCTTCAAGAGATTGCCATCAAGATCAGACACGCTGATATGA | 3054 | 0.4823 | MIKLVVEVVDASDLMPKDGEGSANPFVEVKFDEQQQSTETKHKELNPYWNEKLVFDLDNPRDLAHKTIEVVVYNHNDRNHNNFLGRVRLSGASIPLSESQARVERYPLEKRGLFSNIRGDIALKCYALHDHLPSHPPPQPQDTSSDPPPAAEQHHHHHHPHHHEEEDQGPPLQEINPNMVADEESVVGDGEEKKKKMKKKEKEVRTFHSIPAAAAAAKAQAAVETVRRADFAKAGPPNAMLMQIPKQNPDYGLVETTPPLAARLRYRGGDKISTTYDLVEQMQYLYVNVVKARDLPVMDFTGSLDPYVEVKLGNYKGLTKHLEKNQNPVWKQIFAFSKERLQSNLLEVTVKDKDIGKDDFVGRVMFDLTEVPLRVPPDSPLAPQWYRLEDKKGQKVNNNGEIMLAVWMGTQADESFPEAWHSDAHNVSHSNLANTRSKVYFSPKLFYLRVQVIEAQDLVPSDKGRAPDAVVRVQLGNRTRLTRPSQMRSTNPVWNDELMFVAAEPFEDFIIVTVEDKVGPSAEILGREIISVRSVPPRHETSKLPDSRWFNLHRPSAVGEEETEKKKEKFSSKIHLRMCLEAGYHVLDESTHFSSDLQPSSKHLRKKNIGILELGILSARNLLPLKARDGRTTDAYCVAKYGNKWVRTRTLLDTLSPRWNEQYTWEVYDPCTVITIGVFDNHHINGSNDSEDQRIGKVRIRLSTLETDRVYTHFYPLLVLQPNGLKKNGELHLAVRFTCTAWVNIVAQYGRPLLPKMHYVQPIPVRHIDLLRHQAMQIVAARLSRAEPPLRSETVEYMLDVDYHMWSLRRSKANFHRIMSLLRGVTAVCKWFDDICTWRNPVTTCLVHVLFLILVCYPELILPTIFLYLFVIGIWNYRFRPRQPPHMDPRLSQAETVHPDELDEEFDTFPSRKPSDIVRMRYDRLRSVAGRVQTVVGDLATQGERAQAILNWRDSRATSIFIIFSLIWAVFIYITPFQVIAIIVGLYMLRHPRFRSKMPSVPINFFKRLPSRSDTLI | 1017 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Spst11g00295 | 1017 | CDD | C2C_MCTP_PRT_plant | 447 | 599 | IPR047258 | - | |
| Spst11g00295 | 1017 | ProSiteProfiles | C2 domain profile. | 593 | 715 | IPR000008 | - | |
| Spst11g00295 | 1017 | MobiDBLite | consensus disorder prediction | 186 | 203 | - | - | |
| Spst11g00295 | 1017 | ProSiteProfiles | C2 domain profile. | 1 | 110 | IPR000008 | - | |
| Spst11g00295 | 1017 | MobiDBLite | consensus disorder prediction | 149 | 170 | - | - | |
| Spst11g00295 | 1017 | CDD | C2B_MCTP_PRT_plant | 284 | 410 | IPR047257 | - | |
| Spst11g00295 | 1017 | Gene3D | C2 domain | 1 | 130 | IPR035892 | - | |
| Spst11g00295 | 1017 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 610 | 739 | IPR035892 | - | |
| Spst11g00295 | 1017 | FunFam | C2 domain-containing protein | 279 | 425 | - | - | |
| Spst11g00295 | 1017 | FunFam | C2 domain-containing protein | 593 | 741 | - | - | |
| Spst11g00295 | 1017 | CDD | C2D_MCTP_PRT_plant | 611 | 734 | IPR047255 | - | |
| Spst11g00295 | 1017 | Gene3D | C2 domain | 586 | 739 | IPR035892 | - | |
| Spst11g00295 | 1017 | ProSiteProfiles | C2 domain profile. | 266 | 386 | IPR000008 | - | |
| Spst11g00295 | 1017 | MobiDBLite | consensus disorder prediction | 130 | 203 | - | - | |
| Spst11g00295 | 1017 | Pfam | Plant phosphoribosyltransferase C-terminal | 862 | 1016 | IPR013583 | - | |
| Spst11g00295 | 1017 | Pfam | C2 domain | 610 | 717 | IPR000008 | - | |
| Spst11g00295 | 1017 | Pfam | C2 domain | 3 | 102 | IPR000008 | - | |
| Spst11g00295 | 1017 | Pfam | C2 domain | 447 | 552 | IPR000008 | - | |
| Spst11g00295 | 1017 | Pfam | C2 domain | 284 | 386 | IPR000008 | - | |
| Spst11g00295 | 1017 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 284 | 424 | IPR035892 | - | |
| Spst11g00295 | 1017 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 3 | 149 | IPR035892 | - | |
| Spst11g00295 | 1017 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 447 | 601 | IPR035892 | - | |
| Spst11g00295 | 1017 | ProSiteProfiles | C2 domain profile. | 426 | 545 | IPR000008 | - | |
| Spst11g00295 | 1017 | Gene3D | C2 domain | 429 | 580 | IPR035892 | - | |
| Spst11g00295 | 1017 | Gene3D | C2 domain | 271 | 408 | IPR035892 | - | |
| Spst11g00295 | 1017 | PANTHER | PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 | 3 | 1016 | IPR047259 | - | |
| Spst11g00295 | 1017 | SMART | C2_3c | 611 | 714 | IPR000008 | - | |
| Spst11g00295 | 1017 | SMART | C2_3c | 3 | 108 | IPR000008 | - | |
| Spst11g00295 | 1017 | SMART | C2_3c | 284 | 380 | IPR000008 | - | |
| Spst11g00295 | 1017 | SMART | C2_3c | 447 | 544 | IPR000008 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Spst11g00295 | Spst-Chr11 | 10755642 | 10758695 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Spst11g00295 | 1 | 1017 | Lipid Metabolism Gene Families | AT1G22610 | 71.278 | 0.0 | 1488 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Spst11g00295 | - | - | gmx:100777852 | 1762.66 |