Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00280 ATGGCTTTCTGGGGAGTGGAAGTAAAACCGGGAAAGCCTATTACTCATAAATTTGATGACTCCAAAGGACGCCTCCATATTTCAATGGCCACTTTGGGGTTGGGCACTGCCACAGCAAAAAGCACACTGCAGTGCAATGTTGGAAACAGGAGTCCTGTATATCTATGCTCTCTCTATCCTGGAAACTCCGAGTCATTGCAATTAAATTTAGAGCTCGAGGAAGTTGATAACGTTCTTTTCTCTGTAATTGGCCCTCGGAGCATTCATCTCTGCGGTTACTATCTTGCCACTGCCTGCACAACCAATCTTATTGATAATTCGGAATCATATGGGGAGGATATTGCTGATACAGAAACAGAGAGATCTGATTACAGTGATGAAGATGAGTACGAGGATAGTTTTATTGATGATGACATTGTTCCAGAGGCTTCCTCACCATCTCCTATTTCCAAAGAAGAGGAAGCATCTCGTGATAAAAGACCAAAAAGTAGGAAAGGCAGTCTTCGACGGCTTAGGAAGAAGTACCAGTCATTTGAGTCAGATGATAATGACTGTTACGAAGAAAAGATAATTGTCAATGACAAAATGCATGACCAAACCCAGGAAACTGACAAAGAAGATAGCCTACCTATTTCATCTCTTTTCAAGGATAAAGCTTCCGGAAGGGTCTTGGACGAGGAAATGGATGTTAGTGTTGACAATGGAGCAGCTGATGCCAGCAACAAGAATGGTGAAGAGGGTGGAAATAGTATGTTTGAAACAAACTTAAAGACTGGCCATGCCCTTGCAGATAGTCAGACATATAGGGAAGCTGTACCGTCAAAGCATTTGGTAGATCCTAGCACAGGTCTGGATGTTGGGGATATTAAAAATTTAAAAAAGAAAAAGAAGAGAAAGGAAAAAGAGACAAAGAGCTCCTGCAATGGCCATTCTATCAAACTAGATAATGGTATAGATGAGCCACAAATAGAAAAGACAACCCAGGATTTTGTGACAGGAGGTAAACAAGAGCAGCATGCTGATGCTATGGAAACTGAGACCACAGATAAAATACTGCCTTTGTCTCAGGTTGATCATGGACAGGGTGAAAAGCCAAAGAAGAAAAGGAAAGTAAGGTCTAATGAGGGGGTGGTTTCGGTTGCTACTGATGATTATCATGACAGTCTTGTCAATCTACCTCTAAGAAATGAACAGCACCCAGTTAATGAACTTGCAGCTAAGTCCCTCAATTGCGCTGGCAATGTTGCATTGCCTTATGCTGAGAAGGATACTAAAAAGAATAGAACAAAGAGGAAAAAGCAAGAACAGGGAAACAAAAGTGACAATGAATATCATGAAGATATCATCGAAGAGGACAAAGTCAACACAGATGCAGCAGAGTCACGGACTCTGATTCATAATGTTTTGGAAGAAAAAGAGCAGCATCAGAAGCTAATTAATGAGAAGAGTGTAGATAATGATTTGTATGACTTTTCTAATGGAAATCAATCTGAAGATAGAAAAGTTAAGAAAAGGAAGAAAATGAGCAAAAGTGAGGGTAATGGGGAAGTTGTAAATTCTGATATTACTTCATGTGTTCAGCGAAGTGGTGACACTGAGATCATGGAGGAGGATAGAAATAAGGGGGACGATGCAAAGTTTTCCCAAGTTAGAACATTGATAAATGGACTAGTTATTCAGGAACTAGAGAGAACGGGTATAAAAGATGGCAAAATCGCTGCTTCAGGGAAAAAGATTAGCATCTATTACACTGGCAAGTTAAAGGAAAATGGAGCTTTATTTGAGTCAAATGCTGGCCAAGCTCCTTTCAAATTTCGCCTTGGTAAAGGAGAAGTTATCGAGGGTTGGGATGTTGGCCTTGAAGGCATGCAAGTTGGAGAAAAGAGAAGACTTGTAATTCCACCATCACTGACAGTGATGATATGGTGTGGAATTGAAGAAAAGAGAGAATCTTGTTGTGGAGTTGGGAGGGAAATTGAAAGAAGAATCGAATAG 1995 0.405 MAFWGVEVKPGKPITHKFDDSKGRLHISMATLGLGTATAKSTLQCNVGNRSPVYLCSLYPGNSESLQLNLELEEVDNVLFSVIGPRSIHLCGYYLATACTTNLIDNSESYGEDIADTETERSDYSDEDEYEDSFIDDDIVPEASSPSPISKEEEASRDKRPKSRKGSLRRLRKKYQSFESDDNDCYEEKIIVNDKMHDQTQETDKEDSLPISSLFKDKASGRVLDEEMDVSVDNGAADASNKNGEEGGNSMFETNLKTGHALADSQTYREAVPSKHLVDPSTGLDVGDIKNLKKKKKRKEKETKSSCNGHSIKLDNGIDEPQIEKTTQDFVTGGKQEQHADAMETETTDKILPLSQVDHGQGEKPKKKRKVRSNEGVVSVATDDYHDSLVNLPLRNEQHPVNELAAKSLNCAGNVALPYAEKDTKKNRTKRKKQEQGNKSDNEYHEDIIEEDKVNTDAAESRTLIHNVLEEKEQHQKLINEKSVDNDLYDFSNGNQSEDRKVKKRKKMSKSEGNGEVVNSDITSCVQRSGDTEIMEEDRNKGDDAKFSQVRTLINGLVIQELERTGIKDGKIAASGKKISIYYTGKLKENGALFESNAGQAPFKFRLGKGEVIEGWDVGLEGMQVGEKRRLVIPPSLTVMIWCGIEEKRESCCGVGREIERRIE 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00280 664 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 576 637 IPR001179 GO:0003755
Spst11g00280 664 Gene3D Nucleoplasmin core domain 1 99 - -
Spst11g00280 664 MobiDBLite consensus disorder prediction 421 446 - -
Spst11g00280 664 Gene3D - 519 639 IPR046357 GO:0003755
Spst11g00280 664 MobiDBLite consensus disorder prediction 420 446 - -
Spst11g00280 664 MobiDBLite consensus disorder prediction 360 374 - -
Spst11g00280 664 MobiDBLite consensus disorder prediction 110 173 - -
Spst11g00280 664 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Spst11g00280 664 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 41 638 - -
Spst11g00280 664 MobiDBLite consensus disorder prediction 292 377 - -
Spst11g00280 664 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 572 637 IPR001179 GO:0003755
Spst11g00280 664 SUPERFAMILY FKBP-like 544 637 - -
Spst11g00280 664 MobiDBLite consensus disorder prediction 486 517 - -
Spst11g00280 664 MobiDBLite consensus disorder prediction 119 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00280 Spst-Chr11 9849649 9863342 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst11g00280 575 638 Calmodulin-binding Proteins AT5G48570 43.077 1.85e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00280 K14826 - gmx:100798135 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00280 11 9849649 9863342 Spst11g00280 11 9849649 9863342 ECH