Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst11g00270 ATGGGTGGAAGTCTTACTGATGATGATTGGGAGGTCGCTTCGTCCTCATCTAATGAGGTTCGGACAGTGGTCTTAGTGGGACGTACTGGAAATGGCAAGAGTGCAACGGGTAACACCATTCTCGGAAGGAAGGTCTTCACGTCAAAGGCTAGCTCTTCTGCAGTATCCACCACATGTGAATTGCAGACAGCAGAACTAAATGACGGACAAATTGTTAATGTCATTGACACCCCAGGATTATTTGATTTGTCTGCCGGATCTGAATTTGTTGGAAAGGAAATCGCCAAATGCATTGATTTGGCTCAGGATGGGATCCATGCTGTCATTGTGGTATTCTCAGTTAGAACACGTTTTACTAAGGAAGAAGAAACTGCTCTACGGAGCTTGCAGACATTATTTGGAAACAAAATTGTTGATTACATGATTGTGGTCTTCACTGGAGGAGATGAATTAGAAGATAACCAAGAGACATTTGAGGATTATCTAGGCCGTGAATGTCCAAAGCCTTTAAAGGAGATTCTTCTTCTGTGTGAGAATCGTTTTGTACTTTTTGATAACAAGACTAAGGATGAAAGGAAGCGTTTTGGACAAGTTCAACAACTTCTCTCTTTGGTAGATATGGTTGTATCTCGTAATGGTGGACGACCTTATACAGATGAGTTGTTTGCAGAACTGAAGAAGGGAGCAATGGAGCTGCATAACCAACAAAGAGAGGTTGAATCAAAAGGATATTCTATAGGAGAGATATCGGAGTTTAAAAAGCAAATACAGCAGACATATGATGACCAATTAAAGCGAATTACTGAGATGGTTGAATCAAAATTGAAAGAGGCAACTACGAGGCTTGAGCAACAATTAGCAGAAGAGCAAGCTGCAAGACTTAAGGCGGAAAACAATGCAATGTTAGCTCAACGGAGATCAGACGATGAAATACGTAAACTCAGAGAACATCTTGAGAAGGCCAATGAAGAACTTCGCAAGCGACCTCAAGGTGGTTGTGTCATTCTTTGA 1011 0.4144 MGGSLTDDDWEVASSSSNEVRTVVLVGRTGNGKSATGNTILGRKVFTSKASSSAVSTTCELQTAELNDGQIVNVIDTPGLFDLSAGSEFVGKEIAKCIDLAQDGIHAVIVVFSVRTRFTKEEETALRSLQTLFGNKIVDYMIVVFTGGDELEDNQETFEDYLGRECPKPLKEILLLCENRFVLFDNKTKDERKRFGQVQQLLSLVDMVVSRNGGRPYTDELFAELKKGAMELHNQQREVESKGYSIGEISEFKKQIQQTYDDQLKRITEMVESKLKEATTRLEQQLAEEQAARLKAENNAMLAQRRSDDEIRKLREHLEKANEELRKRPQGGCVIL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst11g00270 336 CDD AIG1 21 227 - -
Spst11g00270 336 Gene3D - 21 236 IPR027417 -
Spst11g00270 336 Coils Coil 268 328 - -
Spst11g00270 336 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 22 323 IPR045058 -
Spst11g00270 336 Pfam AIG1 family 21 235 IPR006703 GO:0005525
Spst11g00270 336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 192 IPR027417 -
Spst11g00270 336 FunFam Immune-associated nucleotide-binding protein 9 20 237 - -
Spst11g00270 336 ProSiteProfiles AIG1-type G domain profile. 18 226 IPR006703 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst11g00270 Spst-Chr11 8982665 8986812 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst11g00270 - - gmx:100801425 563.533