Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01746 ATGAAGAGGTCTCTCAGAAAGTTGGGAGTTCTGACGGTAGAGAAGCATCACCACCGTGACCGCACTAACAAACTTCCTTTCTCCCAGTTAGAGGACCTCGCTCAGGCTACCCAGGATATGCAAGACATGAGAGACTGCTACGATAGCTTGCTTTCCGCGGCAGCAGCCGCCGCCAACAGTGCTTATGAATTCTCAGAGTCCTTGGGAGAATTGGGCTCTTGCCTTCTTCAGAAAACCGCCTTGCATGATGACGAAGAAAGCAGCAAAGTTCTCATAATGCTCGGTAAAATGCAGTTTCAACTCCAGAAACTCATTGATAAATATCGCTCTCATATTACCCAGACAATTACCACTCCCTCCGACTCTCTTCTCAATGAACTTCGCGTTGTTGAGCAGGAGATGAAGCGACATTGTGACGAAAAAAGAGTAGCATATGAGTCCATGTTAACAAGATATAGAGAAAGAGGTAGGTCTAGAAGCGGAAAAGCAGAGAGCATTTCCTTGCAGCAGTTACAAATTGCTCGTGATGAATATGATGAGGAGGCTACATTATTTGTTTTCCGCTTGAAATCTCTGAAGCAAGGGCAATCGTGGAGCCTTCTAACACAGGCAGCACGTCACCATGCAGCTCAGTTGTGTTTCTTCAAGAACGCAGTTAAATCTCTTGAGACAGCAGAGCCACATGTAAAATCAGTAACAGAACAGCATCACATTGATTACCACTTCATTGCTATTGGAGGAGAGGATGATGATGAAGACGATGACGATGACAGCCATGATGAGAATGATGATGGGGAGCTGAGTTTTGACTATGCACAAAATGAAAACGAGCAAGATGTTTCTACATTAAAGAACTCAAAGGAGTTGGGCCTGGTGGAACCTACCTTTCCCAAAGGTCCAACTGTAAAAGCTAAGGGAAACTTGGATAGGCTTCCCAGGAATTCATTCTCCTTCAATTTTAGGTTAGAGAGCCAATCTGCCCCACTTTTTGCTGATAATAAATGTGATTATGGCGAAAAGCTGAGACAGATGCGGCCAACTTTATCACGGAAGTTCGATTCATATGTTCTGCCTACACCAATTGATGCAAAGAGTTCGATACCTCCGAGGTTGAGTAAGCAAGTACCTTCTAAAATAAAGACAAGTTTATATGAGCCTATGAAGAATGAGTGGTATTCATCCCCACTGGAACAAAAGAAATATGGAAACATTTTTGGAGATGGGGGATTTTCTGGTCCTAATGTTAGGCCTCCGCAGTCTGTGCTCAAGGAGAGTAACAGCAATACTGCCTACACAAGATTGCGGCCTCCTTTAATTGATGGTAATTTATCCTCAAATCATGATTTTGTTACTGCTTATTCTAAAAAGATTAAAAGACATGCCTTTTCTGGTCCATTGGTAACTAATGCTTGGCCAACCAAGCCTGTTTCTGTAGAAAGTGTCCAATTGTTTTCTGGACCTCTTCTACGGACATCAATTCCTCAGCCTCCATCATCGGCATCTCCAAAAGTATCTCCTAGTGCTTCTCCCCCTCGTTCATCTTCACCTAAAATAAATGAGCTTCATGAACTTCCAAGGCCTCCAACCATTTCCCCACCAAATTCTAAGTTTATAGGTTTGGTGGGTCATTCAGGTCCATTGGTGTCCCGAGGTCAACAGCTCTCTGCTCGAAGTAATTTAGTTACGTCAAATTCAGCATCTCCATTGCCAATGCCTCCTCAAGCCATGGCTCGAAGTTTCTCCATACCTTCTACTGGTGGTAAAGTTGCAGCATTAGATGGGTCAAGACCTCTAGAAGACCCTAACAGATCATCTGTATCCGAATATATTGATTCTCCTCCTCCGATGCACATTGCTTCATCTACTCTTCAGCCATCATCAGATGGCTCAGAGACTGCTGCTCGGGCTGTCTAA 1914 0.4389 MKRSLRKLGVLTVEKHHHRDRTNKLPFSQLEDLAQATQDMQDMRDCYDSLLSAAAAAANSAYEFSESLGELGSCLLQKTALHDDEESSKVLIMLGKMQFQLQKLIDKYRSHITQTITTPSDSLLNELRVVEQEMKRHCDEKRVAYESMLTRYRERGRSRSGKAESISLQQLQIARDEYDEEATLFVFRLKSLKQGQSWSLLTQAARHHAAQLCFFKNAVKSLETAEPHVKSVTEQHHIDYHFIAIGGEDDDEDDDDDSHDENDDGELSFDYAQNENEQDVSTLKNSKELGLVEPTFPKGPTVKAKGNLDRLPRNSFSFNFRLESQSAPLFADNKCDYGEKLRQMRPTLSRKFDSYVLPTPIDAKSSIPPRLSKQVPSKIKTSLYEPMKNEWYSSPLEQKKYGNIFGDGGFSGPNVRPPQSVLKESNSNTAYTRLRPPLIDGNLSSNHDFVTAYSKKIKRHAFSGPLVTNAWPTKPVSVESVQLFSGPLLRTSIPQPPSSASPKVSPSASPPRSSSPKINELHELPRPPTISPPNSKFIGLVGHSGPLVSRGQQLSARSNLVTSNSASPLPMPPQAMARSFSIPSTGGKVAALDGSRPLEDPNRSSVSEYIDSPPPMHIASSTLQPSSDGSETAARAV 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01746 637 Gene3D Arfaptin homology (AH) domain/BAR domain 28 239 IPR027267 -
Spst10g01746 637 CDD BAR 62 228 - -
Spst10g01746 637 MobiDBLite consensus disorder prediction 246 285 - -
Spst10g01746 637 Coils Coil 120 140 - -
Spst10g01746 637 MobiDBLite consensus disorder prediction 246 270 - -
Spst10g01746 637 MobiDBLite consensus disorder prediction 408 429 - -
Spst10g01746 637 MobiDBLite consensus disorder prediction 548 570 - -
Spst10g01746 637 MobiDBLite consensus disorder prediction 489 637 - -
Spst10g01746 637 Pfam BAR domain 2 228 IPR004148 GO:0005515|GO:0005737
Spst10g01746 637 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 634 IPR037488 -
Spst10g01746 637 SUPERFAMILY BAR/IMD domain-like 31 231 IPR027267 -
Spst10g01746 637 MobiDBLite consensus disorder prediction 617 631 - -
Spst10g01746 637 MobiDBLite consensus disorder prediction 271 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01746 Spst-Chr10 17851532 17855366 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01746 - - gmx:100784870 918.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01746 10 17851532 17855366 Spst10g01746 10 17851532 17855366 ECH