Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01561 ATGGAGGGATTCGCAGGGTTGAGCCATCTTTATGTCACGATATTCCTATCGGGTTTTGGCGGGGTTATCGCTCTCACAGCAATCACTGACGTTACCATGGATGCACTTTGCCCTGGCCAGGATCAGTGCTCTCTTGCCATTTACCTCACCGGAATTCAACAAGCTAAGAAGAAACTGAGCAAGAGTGGAATTGTGTTGCAGGTAGCTGGAGTGGGGTCAGTGTTGGTGACGCCATTGATAGGAAACTTGTCCGACAAGTATGGCAGGAAAACCTTGATCACTCTTCCTCTCACGCTCACTGTCATTCCTCAAGTGATATTGGCATATAGCAGGGAGACCAAATTCTTCTATGCGTACTATGCTGTGAAAACTCTTGCTGCCATGGTAGGCGAAGGGTCCTTCCACTGCCTGTCTTGTACATACGTGGCAGACATGGTTCCACATGGGAAACGAACATCATCGTTTGGAGCACTTGCTGGTGTTGGATCAGCAACATTTGTCTGTGGATCATTAGCAGCTCGTTTCCTATCCACTGCCTTAACATTTCAGGTTGCTGCTGTCTCGTCAATGATTGCATTGGTGTACATGAGAATTTTCCTTAAGGAGAGTGTACCTGGTGTTGGCACTAGCCAGCCATTATTGAAAGAGGGCGAGGAGCCATGTCCTGGTGATGATTCATCGCGTAAGACAACAGCATTTAAGAAACTGCCCTCTTTGTGGGATTTGATTCGCTTGCTCAAGTGTAGTCCCACGTTCTCGCAAGTAGCAATTGTTTCGTTCTTCAATAGTCTTGTGGCCAGTGGCTTGCTGGCTGTATTGCTGTATTATTTAAAGGCACGTTTTCAATTCAACAAGGACCAGTTTGCAACAACAATGATGATTACTGCGGTTGGAGCCACTTTTGCACAACTATTTTTCATGCCCCTTTTAGTGTCAGTTATGGGAGAGGAGAAGCTGCTCTCCACAGCGCTCTTGGTTAACTGCATAGATGTCCTTGTCTACAGCGTAGCATGGTCACCATGGGTTCCTTATGCTCTGGCAGTTTTCTCTGTGTTCTCAGTTTTTTCTGGGCCAAGTTTATCCAGCATCGCATCGAAGCAAGTTGAATCTAATGAACAGGGAATGGTTCAAGGATGTCTTTCAGGAATTAGTTCCTTCGCCAGCATCATCGCTCCGTTAGTTATCAGTCCACTGACAGATGATAGCATTTGTTCTGAGTCTAATGATCCGTGCTGCTCCTCCTCCTCCTATTGCGGGTGGCACAACTAG 1269 0.4673 MEGFAGLSHLYVTIFLSGFGGVIALTAITDVTMDALCPGQDQCSLAIYLTGIQQAKKKLSKSGIVLQVAGVGSVLVTPLIGNLSDKYGRKTLITLPLTLTVIPQVILAYSRETKFFYAYYAVKTLAAMVGEGSFHCLSCTYVADMVPHGKRTSSFGALAGVGSATFVCGSLAARFLSTALTFQVAAVSSMIALVYMRIFLKESVPGVGTSQPLLKEGEEPCPGDDSSRKTTAFKKLPSLWDLIRLLKCSPTFSQVAIVSFFNSLVASGLLAVLLYYLKARFQFNKDQFATTMMITAVGATFAQLFFMPLLVSVMGEEKLLSTALLVNCIDVLVYSVAWSPWVPYALAVFSVFSVFSGPSLSSIASKQVESNEQGMVQGCLSGISSFASIIAPLVISPLTDDSICSESNDPCCSSSSYCGWHN 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01561 422 CDD MFS_SLC46_TetA_like 10 400 - -
Spst10g01561 422 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 8 402 - -
Spst10g01561 422 Pfam Major Facilitator Superfamily 13 392 IPR011701 GO:0022857|GO:0055085
Spst10g01561 422 ProSiteProfiles Major facilitator superfamily (MFS) profile. 10 422 IPR020846 GO:0022857
Spst10g01561 422 SUPERFAMILY MFS general substrate transporter 59 400 IPR036259 -
Spst10g01561 422 Gene3D MFS general substrate transporter like domains 9 404 IPR036259 -
Spst10g01561 422 PRINTS Tetracycline resistance protein signature 62 81 IPR001958 GO:0022857
Spst10g01561 422 PRINTS Tetracycline resistance protein signature 376 399 IPR001958 GO:0022857
Spst10g01561 422 PRINTS Tetracycline resistance protein signature 155 177 IPR001958 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01561 Spst-Chr10 16288738 16294067 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01561 2 399 Organic Solute Cotransporters AT2G16990 40.097 4.17e-96 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01561 - - gmx:100805770 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01561 10 16288738 16294067 Spst10g01561 10 16288738 16294067 ECH