Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01558 ATGGGAAGCCCAAAGAAAGTGTCACCATCAACAAGCAGCCCACGGAGAAACCCAAGAACACTCTATGATCTCTTTGAGCAGGAGAATCCTCACTTCACCGTCCCATCTTCTTCTCCCACTTCAGGATATGAAGAACTTTTCTCCACTATTTCTTATTGCACCTTTGTTTTCACCTTCACTGACCCTTCAGAATCTCCTGCACAAAGAGACTCCAAGAGGCTTCAACTCACAAGACTCGTCACGATATTGAAGTCTTCCAAGAAGCCAGTGAATGAAAAATTTTTGGGGGCTCTAGTGGCCATGATCTCGGCCAACCTCTTCAGGCCACTCCCTCCACCTTCCAACCCTTCTGCCATCACAGACTTGCCTGAAGAAGAAGACCCCATCTCCATATTTTCACCGGTCTGGTCACATCTACAAATAGTTTATGAGATACTTCTCAAGCTTGTTAACAGCACAGACCAAAGGATACTGAGAGAGTGCATAGATCATTCTTTCCTCCGCAACCTGCTAGCACTTTTTCAATCAGAAGATCCAAGGGAGCGTGAGAGTTTGAAAAATGTGTACCACAAGATATATTCCAAGTTCATTTCTGATCGTTCCTTCATGAGGAAATCAATGACCGAGGTGCTGTTGAACTACATGTTTCAGACAGAAAAGCATACGGGTATTGCAGACTTGCTTGAGATATGGGGAACCATAATCAATGGCTTTACCGTGCCACTCAAGGAAGAGCACAAACTGTTCCTAATGAGAGTGCTCATTCCTCTACACAAGACCAAGGGGATGCAAGTGTACTGTAGGCAATTGGCTTATTGCGTGTCACAGTTTGTGCAGAAGGAGCCTATGCTTGGAGGGGTTGTTGTTAGAGGGATTTTGAGATACTGGCCTGTCACAAACTGTCAAAAGGAAATCTTGCTAATTGGGGAGTTGGAAGATCTGGTTGAGAATTTAGACCCTGACCAGTATCGTAAGTTGGCCTTGCCCTTGTGTACCCAGATTACCAAATGCATCAATAGTTGGAATTCGCAGGTAGCGGAGCGTGCGCTCTATGTGTGGAACAATGAGCAGTTCGTGAAAATGGCACTGATAGGAACAGTAGAAGTGTTTACTGTGATTGTAGAAGGCATGGAAAAGAACCTGAAGTGGCATTGGAGCAAGAGCGTTAGGCAGCTAACAGAATGTGTGAAGGTGATGCTGGAAGAAATGGATCCAGATCTGTATTCAAAGGGTCTCATGGACATGGAAGCCAAAGAGTCAATGGCACATCAAGAAGACATCAAAAGAAAAAAGAGATGGGAAAGAATAGAATTTGAAGCTGAAAAGAATCAGTTTCTCAACCCACGACGTTATATACGTGTCTCCTACTGA 1371 0.4442 MGSPKKVSPSTSSPRRNPRTLYDLFEQENPHFTVPSSSPTSGYEELFSTISYCTFVFTFTDPSESPAQRDSKRLQLTRLVTILKSSKKPVNEKFLGALVAMISANLFRPLPPPSNPSAITDLPEEEDPISIFSPVWSHLQIVYEILLKLVNSTDQRILRECIDHSFLRNLLALFQSEDPRERESLKNVYHKIYSKFISDRSFMRKSMTEVLLNYMFQTEKHTGIADLLEIWGTIINGFTVPLKEEHKLFLMRVLIPLHKTKGMQVYCRQLAYCVSQFVQKEPMLGGVVVRGILRYWPVTNCQKEILLIGELEDLVENLDPDQYRKLALPLCTQITKCINSWNSQVAERALYVWNNEQFVKMALIGTVEVFTVIVEGMEKNLKWHWSKSVRQLTECVKVMLEEMDPDLYSKGLMDMEAKESMAHQEDIKRKKRWERIEFEAEKNQFLNPRRYIRVSY 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01558 456 Gene3D - 41 438 IPR011989 -
Spst10g01558 456 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 43 439 IPR002554 GO:0000159|GO:0007165|GO:0019888
Spst10g01558 456 SUPERFAMILY ARM repeat 48 418 IPR016024 -
Spst10g01558 456 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 37 443 IPR002554 GO:0000159|GO:0007165|GO:0019888
Spst10g01558 456 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 39 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01558 Spst-Chr10 16250767 16252451 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01558 K11584 - gmx:100802007 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01558 10 16250767 16252451 Spst10g01558 10 16250767 16252451 ECH