Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01557 ATGGCGGCGGCGGCGGCGGTGACTCCATCGTGGCAGCCTCAGGAGCAAGGGTTCAAGGAGATCTGCGGCCTCCTTGAGCAACAGATTTCGCATACTTCGTCCGCCGACAAGGCTCAGATTTGGCAACACCTTCAACGCTACTCGCACCTTCCTGACTTCAACAATTACCTTGCCTTCATCTTCTCCCGTGCCGAGTCGCATCGGTTTTCCACTTTTCCATGTTTGTTACGCGCGTTATGTGCTTTCAATGCGAAACAAAATACACCCAATGTTTCTGGGCTTACATCTGAAAAGGGAAAATCAGTGGAAGTTCGTCAGGCTGCAGGCTTATACCTGAAGAATAACCTCAGAAATGCTTATAAATCTATGCAGCCTGCATACCAACAGTATGTGAAATCGGAGTTGCTACCTTGTCTTGGTGCAGCGGATAAGCACATAAGGTCTACAACAGGAACTATTGTTAGTGTCGTTGTTCAAATAGGAGGAGTTGCTGGGTGGCCTGAATTGTTGCAAGCCCTCGTAAATTGCTTAGACAGTAATGATCTAAATCACATGGAAGGTGCAATGGATGCATTATCCAAGATTTGTGAAGATATTCCTCAATATCTTGATGCTGATGTACCAGGGTTAGCAGAACGCCCTATTAACATATTTCTTCCCAGATTATTTCGGTTTTTCCAATCTCCTCATGCTTCATTGAGAAAGCTATCACTGGGTTCTGTAAATCAATACATTATGTTAATGCCTTCTGCTCTATATGTATCCATGGATCAATATCTTCAAGGTCTGTTTATTCTCTCAAATGACCCCAATGCTGAAGTGCGGAAGTTGGTTTGTGCAGCATTTGTTCAGCTAATTGAAGTCCGTCCGTCTTTCTTGGAGCCACATTTAAGGAATGTGATTGAATACATGTTACAAGTCAACAAGGACACAGATGATGAAGTAGCCCTGGAAGCCTGTGAATTTTGGTCTGCTTATTGTGATGCTCAACTGCCACCTGAAAACTTAAGAGAATTCTTGCCACGTCTTATTCCAGTATTGTTGTCAAACATGGCTTATGCTGATGATGACGAATCACTTATTGAAGCTGAGGAAGATGGATCTCAACCTGATAGAGATCAGGATCTTAAGCCGCGATTTCATGTATCAAGGTTTCATGGATCAGACGACGTAGAAGATGATGATGATGATGTTGTCAACACATGGAATTTAAGGAAATGCAGCGCAGCTGCTCTTGATATTCTTTCAAATGTGTTTGGAGATGAGATTCTTCCTACTCTTATGCCTATTGTTGAGGCTAAGTTGTCTGCTGGTGGGGATGATGCTTGGAAAGAAAGGGAAGCTGCTGTCTTGGCTCTTGGTGCCATAGGTGAAGGCTGCATCAATGGTCTTTATCCTCATCTATTGGAGATTGTGGCATTTCTTATCCCACTACTTGATGATAAGTTTCCTCTGATACGAAGTATTTCATGCTGGACACTATCTCGATTTAGCAAATTTATTGTTCAGGGTATTGGACATCCTAAAGGATATGAACAATTTGATAATGTTCTTATGGGGCTTCTACGAAGAATTTTGGATGACAATAAGCGGGTGCAAGAGGCTGCTTGTTCAGCTTTTGCAACTCTTGAAGAGGAGGCTGCTGAAGAGTTGGCACCACGCTTGGAAATTATACTGAAGCACCTGATGACTGCATTTGGGAAATATCAAAGACGAAACCTCAGAATTGTATACGATGCAATTGGAACTCTAGCTGAAGCTGTTGGAGGAGAGTTGAATCAGCCTGTTTATCTTGACATTCTCATGCCACCATTAATCGAGAAGTGGCAGCAACTTTCAAATTCAGACAAAGATCTTTTTCCACTCCTGGAATGCTTTACATCTATAGCACATGCTCTGGGAACTGGTTTCACTCAATTTGCTGAACCTGTATTTAGGAGGTGCATAAATATAATCCAGACCCAACAGTTTGCTAAGGTTCGGGCTGATTCTACTGCAACTGGGGTTCAGTATGACAAGGAGTTCATTGTATGCTCTCTTGATTTGCTTTCTGGACTAGCAGAGGGTCTTGGCAGTGGAATAGAGAGTTTGGTTGCACAATGTTCTTTGAGGGATCTTCTTCTGCATTGTTGTGTGGATGATGCTCCTGATGTTCGACAAAGTGCCTTTGCTCTACTTGGAGACCTGGCACGAGTGTGCCCGGTTCATTTGCACCCTCGTTTGTCTGAGTTTCTTGAGGCTGCAGCCAAGCAGCTGGAGATTTCTAAGGTAAAGGAGGCTATTTCAGTAGCAAATAATGCGTGCTGGGCAATTGGAGAATTGGCTGTGAAGGTTCGTCAAGAAATTTCTCCCATTGTCTTAACTGTAATTTCATGCCTGGTTCCCATTCTTCAGCACGCAGAGGGACTCAACAAATCACTTATAGAGAATAGTGCAATAACATTGGGGAGGCTTGCTTGGGTCTGTCCAGAGCTTGTATCACCACATATGGAGCATTTCATGCAATCTTGGTGCACTGCTTTGTCAATGATACGAGATGATGTTGAGAAAGAGGATGCTTTTAGAGGTCTATGTGCTATGGTCAAAACTAATCCTTCTGGCGCTCTAAGCTCGCTTGTCTACATGTGCAAAGCGATTGCAAGTTGGCATGAAATAAGGAGTGAAGATTTACACAATGAAGTCTGTCAGGTCTTGCATGGGTATAAACAGATGCTGCGTAATGGAGTGTGGGATCAGTGTATGTCAGCTTTGGATCCTCCAGTAAAAGAAAAGCTTTCAAAATATCAAGTATAA 2793 0.4318 MAAAAAVTPSWQPQEQGFKEICGLLEQQISHTSSADKAQIWQHLQRYSHLPDFNNYLAFIFSRAESHRFSTFPCLLRALCAFNAKQNTPNVSGLTSEKGKSVEVRQAAGLYLKNNLRNAYKSMQPAYQQYVKSELLPCLGAADKHIRSTTGTIVSVVVQIGGVAGWPELLQALVNCLDSNDLNHMEGAMDALSKICEDIPQYLDADVPGLAERPINIFLPRLFRFFQSPHASLRKLSLGSVNQYIMLMPSALYVSMDQYLQGLFILSNDPNAEVRKLVCAAFVQLIEVRPSFLEPHLRNVIEYMLQVNKDTDDEVALEACEFWSAYCDAQLPPENLREFLPRLIPVLLSNMAYADDDESLIEAEEDGSQPDRDQDLKPRFHVSRFHGSDDVEDDDDDVVNTWNLRKCSAAALDILSNVFGDEILPTLMPIVEAKLSAGGDDAWKEREAAVLALGAIGEGCINGLYPHLLEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFIVQGIGHPKGYEQFDNVLMGLLRRILDDNKRVQEAACSAFATLEEEAAEELAPRLEIILKHLMTAFGKYQRRNLRIVYDAIGTLAEAVGGELNQPVYLDILMPPLIEKWQQLSNSDKDLFPLLECFTSIAHALGTGFTQFAEPVFRRCINIIQTQQFAKVRADSTATGVQYDKEFIVCSLDLLSGLAEGLGSGIESLVAQCSLRDLLLHCCVDDAPDVRQSAFALLGDLARVCPVHLHPRLSEFLEAAAKQLEISKVKEAISVANNACWAIGELAVKVRQEISPIVLTVISCLVPILQHAEGLNKSLIENSAITLGRLAWVCPELVSPHMEHFMQSWCTALSMIRDDVEKEDAFRGLCAMVKTNPSGALSSLVYMCKAIASWHEIRSEDLHNEVCQVLHGYKQMLRNGVWDQCMSALDPPVKEKLSKYQV 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01557 930 Pfam HEAT-like repeat 443 496 - -
Spst10g01557 930 SUPERFAMILY ARM repeat 11 922 IPR016024 -
Spst10g01557 930 Pfam Importin-beta N-terminal domain 99 140 IPR001494 GO:0006886|GO:0031267
Spst10g01557 930 Gene3D - 8 930 IPR011989 -
Spst10g01557 930 PANTHER IMPORTIN BETA 20 906 IPR040122 GO:0006606
Spst10g01557 930 Pfam HEAT repeat 705 733 IPR000357 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01557 K18752 - gmx:100792702 1687.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01557 10 16233696 16248535 Spst10g01557 10 16233696 16248535 ECH