Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01553 ATGGGATGTGTTGCTTCCAAACTAGAGGAAGAAGAGGAAGTGGTGGCTATTTGTAGAGAGAGAAAACGGCTCTTAAAGCTAGCTGTGGAGAAAAGATATGCACTTGCTGTGGCTCATTGTAAGTATTTTCACTCTCTCAATGCAGTAGCTGCGGCCATTAAGTTCTTTGTTGCACGCCACTCGTTACCTTCATCACCTTTCCTCATAACTTTCCCTCCTCCTTGCGCTTCTTCTCACTCTCCTTCTCCACCCCCTGAGAATGTCATCACCAACCCCATGTTCCTCCAGCAGGCACCCTCAGAAACCAAGCATGAAGCCATTGGTTGTGACTCATGCATCTCTTCAACAACCTCAGAGTCTTCTGAGGAAGAGAGTGAAGAGAAAAGGGAAGGGGAGGACGAAGGGAAGGGAGTAGAAGAGCAGCACGAACAACCATGTGGGTACTATTGCATGCCTATGACTATGACTATGCCTATGACCATGTCCATGTCTATGTCTATGCCTATGCCACCTTCAATGCCATCCCCTCAGAGAGATTTTGGATGGGACTTCTTCTACCCTTTTGACAGTATGAGGAGTGACGTTATGAGTGGCTACCACAGGAACTTAGACGATGATTTGAGGGCAGTGAGGGAGGAGGAAGGGATTCCTGAGTTGGAAGAAGAAGTGGAGAGAGAAGAGGTTGAGCACAAAGTGGTGAGTGTTGAAGAGAATAGTAACACCAATAATAATGGTAATACTGAAGGAGTTGATGAACAAGTGATGAGTGGTGTTGAAACAGTGATGGTGGTGGATGCGGCCACTGAGAACCAAGGGGAGCAAAGGGGGCTTGCAGTTCTTGATACACCAGCCGAGGGGAGAGAGTTGCTTGAAGCATTGAAAGACATTGAGGACCATTTTCTCAGGGCTTATGATTCTGGTAAAGATGTGACCAGAATGCTGGAAGCTAATACAATCCCCCTTCATTCTAGTTTGGATGAAACAAAAGAAAGTTCGACTAAACTCATTCATGCAATAACATGGAAGTCCATTTCATCTAGGCAATCATCATGCAAGAGTCTCATGGCTCCAAATATGAAAAGTTCCTCAACTTGGGTGGAATATGAGAATGATCTGTTTGATGATTATAGAGGAATGGTTTCGGGAAGTCATTTATCAACCTTAGGAAGGTTATATGCGTGGGAAAAGAAACTCTTTGAGGAGGTTAAGGCTGGAGATAGCACAAGGAAGAATTACGAAAAAAAATGCGCACAGTTGAGAAATAAGAATGTTAGAGGAGATGATCTGCTGAGCACAGACAAAACTAAAGTTGAAGTGAAAGATCTGTATGCTGGGATCCTGGTTGCAATTCGACGTGCCGAGTCAATCTCTAAGAGAATTGAAAATATGAGAGATGAAGAACTGCTACCTCAAATCGTTGAACTGTTAAAAGGCCTGACTCAGTCATGGAAAATCATGTTGGAGTCCCATGAAACCCAGAAGAAGATTCTATCAGAAGTTAAGTACTTCACATGCGCCACGAATGGGAAATTTTGTAACCAATCTCATGGATTTGCAACTAGTCAGCTCGAAGTTGAGCTTCAAAATTGGCGTGACTGCTTCAAAGAGTACACTGCAGCACAAAAAGCATATGTTGAAGCTTTACATGGATGGCTGAGTAAGTTCATAGTCCCTGAACTTGAGTTTTACTCAAGAAGCAAAAATGTTGCCATCCCATACCAATTCAACGGGCCACCATTGCTTGTGATATGCAACAATTGGCTAGCTTCACTGCAGAAGTTACCTGATAAAATGGTAACACTTGCATTGAAAAGCGTTGTGAAAGATGTTAGAGCTTTGCAGCTTCAACAAAACAAAGAACAACAGCAGAAAAGGAAGGTAGACAGGCTAACAAGAGTTTTAGACAGAAGATACTCTTCCGGACCACATAAAGTGGAGACTAAGATGCTTGAGCTCCATGCCGACGATCACGAGTCAGAGGGAGGAACTGATCATCAAGATGAGTGCATGATGGAGAAACATGATCATTTGGAGACACTGAGAAGAAAAGTTGAAGTGGAGAAGGAGAAGCACCACAGTAGCATGCTGGAAACTCAGAGGATGACCTTACATGGATTGCAATCTGGGTTTTCTCTAGTGTTTGAATCCTTGTCAGAGTTCTCCAAAGCATCACAAAAAATGTACAATGGTCTTGTAAGTTATAGTGAAAATAGTGACAAGGTTGGGAACATTACATACATAGAGGGTGGCTGCAATGTCGAAAATTGCAACAGCCAAAACGGACAATAG 2289 0.4329 MGCVASKLEEEEEVVAICRERKRLLKLAVEKRYALAVAHCKYFHSLNAVAAAIKFFVARHSLPSSPFLITFPPPCASSHSPSPPPENVITNPMFLQQAPSETKHEAIGCDSCISSTTSESSEEESEEKREGEDEGKGVEEQHEQPCGYYCMPMTMTMPMTMSMSMSMPMPPSMPSPQRDFGWDFFYPFDSMRSDVMSGYHRNLDDDLRAVREEEGIPELEEEVEREEVEHKVVSVEENSNTNNNGNTEGVDEQVMSGVETVMVVDAATENQGEQRGLAVLDTPAEGRELLEALKDIEDHFLRAYDSGKDVTRMLEANTIPLHSSLDETKESSTKLIHAITWKSISSRQSSCKSLMAPNMKSSSTWVEYENDLFDDYRGMVSGSHLSTLGRLYAWEKKLFEEVKAGDSTRKNYEKKCAQLRNKNVRGDDLLSTDKTKVEVKDLYAGILVAIRRAESISKRIENMRDEELLPQIVELLKGLTQSWKIMLESHETQKKILSEVKYFTCATNGKFCNQSHGFATSQLEVELQNWRDCFKEYTAAQKAYVEALHGWLSKFIVPELEFYSRSKNVAIPYQFNGPPLLVICNNWLASLQKLPDKMVTLALKSVVKDVRALQLQQNKEQQQKRKVDRLTRVLDRRYSSGPHKVETKMLELHADDHESEGGTDHQDECMMEKHDHLETLRRKVEVEKEKHHSSMLETQRMTLHGLQSGFSLVFESLSEFSKASQKMYNGLVSYSENSDKVGNITYIEGGCNVENCNSQNGQ 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01553 762 Pfam Protein of unknown function (DUF630) 1 60 IPR006868 -
Spst10g01553 762 Coils Coil 209 236 - -
Spst10g01553 762 PANTHER UNCHARACTERIZED 1 735 - -
Spst10g01553 762 MobiDBLite consensus disorder prediction 105 143 - -
Spst10g01553 762 Coils Coil 613 633 - -
Spst10g01553 762 Pfam Protein of unknown function (DUF632) 289 611 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01553 Spst-Chr10 16175774 16179874 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01553 1 626 Acyl Lipid Metabolism Gene Families AT2G27090 28.895 4.11e-62 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01553 - - gmx:100807897 1181.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01553 10 16175774 16179874 Spst10g01553 10 16175774 16179874 ECH