Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01550 ATGGCGCTTTGGCACCGAATCGGAAACCTCAAGCTCAGAACCCTGTGCACCCAATTCAAACGATCTTACATTCATCTTCTCCATGCTTCCGCCCCCAAACCGTGCCCTGTGGACATTCCACAGCCGAATCCCGTGTTTCATGGCAGTCCCAATAGCGTTTTCAGTACCGTGAGATTCTTCGCTGCACCAGTTCAGGTAAAGCACAGGAATGTGGAGGAGGATCCAAGTGAGCTACGGTTGAATGAGAAAATCACAGCTTCATATGTCAGGCTTGTGGAGGATGATGGGCATTCAATAGTACCAAGGTTTGAAGCATTGGAACGTGCCAAGGCGCTTAAACTTGATTTAGTTGAGGCTGACATGACACTACGAAAGGATATTAAAGAAGTGCGATTTTCTGAAAAAACTGAAACAAAAGACCTGAAGAACAAAGCGGGTATGATTATAAAGTTAATGGAGAAGGGTTATCGGGTGAAGTGCAAGGTATCAGGCAAGGAAAATCAGGACCCGACAGTATTATTTTCTCCTCTTCTTGCTCTGATGGAAGATGTCTACATTGTGGAAAGTGGACCACATATGGCAAGAAAAGATGCATACATGGTCGTCAGACACGTTAAGTTTGGGCAATCGAAGAAAAGTGGGAAGAAATTTCAAAATGCGACAAATGTTACAACTCAGGAGGGTCATATGGAGACATCAACTGCCAATTCTAGTGATTCTGTTGAATATGAGAGTCATGATGCAGAATCTGGATTTGAAACGGAGGAGGAGGCCCCTTTTGATGGAGACAAGCTTTTTAAAAGTTCCAGGTCTGCATTTAGCAGCAATATTACTGCCTCCCCTGATTATCAAACAAATGCTGCTCCAATTAATGATCCAGTATCTCCTCCTGTGTCCGAAAATCGGTATAGGAGAACTAATCATCATGGTGAAAATAACGTCCAATCTAATGCACAAGTGCCTCCTGCTGTGACTGAGAATAATAGATACAGAAGAGTAGAGCCAAGAAACAGATTCCAGCAAACATCAAATAATGCAGATATGAACAACTATCAAGGTCCAGGAACAAGAGATGGATTCAGGTCTCCTCCGCAAAATTGGAATCGCCCGAAGCAAGCACCGGCAAATGTTGAAGTTGATCCCAGAATAGAAAATAACAGGCAAGCTTTTACTCCTCATGGATCAAGACACTCAATTCCTTCCCGCAATCTTCCTCCAAATGGTCCTAATACCCCTAGACCTGGTTATGGCAATTTTAGTGGTCCAAATGAGGGTATCCCCAAGCCTCCTGGTGCTCCCAATACCCCAAGACCTTCTAGTTATGGCAGTTTTAGTGCTCCAAATGATGGCATCCCCAAGCATCATAGTTCTCCCAATACCCCCAAGACCTTCTAG 1395 0.4416 MALWHRIGNLKLRTLCTQFKRSYIHLLHASAPKPCPVDIPQPNPVFHGSPNSVFSTVRFFAAPVQVKHRNVEEDPSELRLNEKITASYVRLVEDDGHSIVPRFEALERAKALKLDLVEADMTLRKDIKEVRFSEKTETKDLKNKAGMIIKLMEKGYRVKCKVSGKENQDPTVLFSPLLALMEDVYIVESGPHMARKDAYMVVRHVKFGQSKKSGKKFQNATNVTTQEGHMETSTANSSDSVEYESHDAESGFETEEEAPFDGDKLFKSSRSAFSSNITASPDYQTNAAPINDPVSPPVSENRYRRTNHHGENNVQSNAQVPPAVTENNRYRRVEPRNRFQQTSNNADMNNYQGPGTRDGFRSPPQNWNRPKQAPANVEVDPRIENNRQAFTPHGSRHSIPSRNLPPNGPNTPRPGYGNFSGPNEGIPKPPGAPNTPRPSSYGSFSAPNDGIPKHHSSPNTPKTF 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01550 464 MobiDBLite consensus disorder prediction 337 372 - -
Spst10g01550 464 SUPERFAMILY Translation initiation factor IF3, C-terminal domain 126 206 IPR036788 GO:0006413
Spst10g01550 464 PANTHER TRANSLATION INITIATION FACTOR IF-3 6 120 IPR001288 GO:0003743|GO:0006413
Spst10g01550 464 MobiDBLite consensus disorder prediction 221 259 - -
Spst10g01550 464 MobiDBLite consensus disorder prediction 388 404 - -
Spst10g01550 464 MobiDBLite consensus disorder prediction 437 464 - -
Spst10g01550 464 Pfam Translation initiation factor IF-3, N-terminal domain 80 119 IPR019814 GO:0003743|GO:0006413
Spst10g01550 464 Gene3D - 124 213 IPR036788 GO:0006413
Spst10g01550 464 SUPERFAMILY Translation initiation factor IF3, N-terminal domain 78 137 IPR036787 GO:0003743|GO:0006413
Spst10g01550 464 MobiDBLite consensus disorder prediction 277 464 - -
Spst10g01550 464 MobiDBLite consensus disorder prediction 310 324 - -
Spst10g01550 464 MobiDBLite consensus disorder prediction 277 292 - -
Spst10g01550 464 MobiDBLite consensus disorder prediction 221 241 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01550 K02520 - gmx:100808433 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01550 10 16135949 16149831 Spst10g01550 10 16135949 16149831 ECH