Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01543 ATGAGCACTGCAATACAAAATAACACAAACCCTAATACAAAAAGTTTAAGAGAAAAGGAAAAACAGATAAAATACCAATCACTTCGGTGCGGGGTTGGATTGCCACCCATAAAATCCCCAAATTCGAATCCCATTCCCAACTCCTTTTCTCCTGCTTCTGTCGTCACATTACAGGGGTTAAATTCTCTGCACGACATGTCTGGAGAGCGAGCAGTGCATCCCGATTGTCGGAATGCTAGTAACCCTTTTCATGAATGTAGTGATTATTGTTTTAGAGTTATAGCTGAAGCCAAGATTAAATCGCAACATAGGAAACCAGAAGTTGGACAAGGTAGTGGTGGAAATAACTCTAAGCAAGCCATCCCAGATGAGTCACACGCAGATGAAGAAATACATGATGACAGACCTGATCCTGAAGAAAACTCTGATAGTGATCCTGACCAGCCTGCTGCGCAGGAAGCAGAGCAAATTGAGGCTGACTGCACAAAACTTTCTGGGAGACAGAAAAAGTGGATGGAACTGAGAGCCAAGATGCAAGAAGCAAAAAAGCGAAATCAAATTGAAATAGCTGCTGAAAAGAAGAGGATGGAAGCTCCAACGGAGTCTAGGGGTGTTTCAAAACAAAAGTGGCTTGAGGATAGGAAGAAAAAAATTGGAAAACTTCTTGATGCAAATGGACTGGATCTGACAAAGGCATATATGCTTGACACACAGGAGGCAGCAGAAGTAAAATACAAGAAATGGGAGAAGGATCCTGCTCCATTTGGATGGGATGTCTTTAATCAGAAAACATTATACAATGCATACAAAAAGCGGACGAAGAATGTTGAAGTTGATGTAGAAGAATATAATAGAATGAAAGAAGCTGATCCAGAGTTCTACCGTGATGCTTCAAGTCTCCAGTATGGAAAGGCACCAAAAGTCTCAGAGGAGAAGGTTGACAGGATGGTACAAGAGCTAAAGGATAGGGAAGAGAAGCGCAAGTCATTTAGCAGGAGAAGACGGTTTCATGAAGAGAAAGATATTGACTCAATCAATGACCGTAACGAGCATTTTAACAAGAAGATTGAACGAGCCTTTGGTAAATACACGCTGGAGATTAAAAATAATCTTGAGCGAGGCACTGCATTGCCTGACTAA 1140 0.4149 MSTAIQNNTNPNTKSLREKEKQIKYQSLRCGVGLPPIKSPNSNPIPNSFSPASVVTLQGLNSLHDMSGERAVHPDCRNASNPFHECSDYCFRVIAEAKIKSQHRKPEVGQGSGGNNSKQAIPDESHADEEIHDDRPDPEENSDSDPDQPAAQEAEQIEADCTKLSGRQKKWMELRAKMQEAKKRNQIEIAAEKKRMEAPTESRGVSKQKWLEDRKKKIGKLLDANGLDLTKAYMLDTQEAAEVKYKKWEKDPAPFGWDVFNQKTLYNAYKKRTKNVEVDVEEYNRMKEADPEFYRDASSLQYGKAPKVSEEKVDRMVQELKDREEKRKSFSRRRRFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01543 379 Pfam SYF2 splicing factor 225 372 IPR013260 -
Spst10g01543 379 MobiDBLite consensus disorder prediction 1 22 - -
Spst10g01543 379 PANTHER GCIP-INTERACTING PROTEIN P29 68 377 IPR013260 -
Spst10g01543 379 MobiDBLite consensus disorder prediction 321 348 - -
Spst10g01543 379 MobiDBLite consensus disorder prediction 122 139 - -
Spst10g01543 379 MobiDBLite consensus disorder prediction 189 208 - -
Spst10g01543 379 MobiDBLite consensus disorder prediction 101 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01543 Spst-Chr10 16047355 16050298 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01543 K12868 - gmx:100787714 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01543 10 16047355 16050298 Spst10g01543 10 16047355 16050298 ECH