Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01322 ATGAACTCTCTATCACTCTTGGCCTTCCTCTGCGCAATTCTCGCCCATTCCATCTCCGTCTCTGCGAACTCCGCCGCGTATCCTTCTATCCCTGGCGTCGACACCGACGATGACTGCTCCCTCCGCGGAGAAGGCGGCGCTCTGGTTCCTCCGCGACGAGAAGTGTACGACGAGGGCCGAATCTTCGACATCAGCCACCGGTACGTGCCTGAGATGCCGGTTTGGGACTCGACGGAGGGGCTCGGACAAGACTTTCTGTGGCTTGGAACTAGCATGAAGAAGGGCTGGCGCGCTAACAACTCCATTTTTAAGCTTGGTGCTCACACCGGCACTCATGTCGACGCGCCCGGTCACTTTTACGACAATTACTACGACGCCGGCTTCGACGTCGACTCACTCGACCTAACAGTCCTCAATGGCCTTTCACTTGTGGTTGATGTTCCACGGGATAAAAACATTACCGCTGAGGTTATGAAGTCCTTGAATATCCCTAGAGGTGTACGTCGTGTGCTTTTCAGAACTTTAAACACAGACAGGCGACTCATGTTTAAGAAAGAATTTGATACAAGCTATGTGGGATTCAAGGAGGATGGTGCAAAATGGCTTGTAGAGAACACTGACATCAAACTAGTAGGAATTGATTACTTATCTGCTGCTGCTTATGATCACTCGGTTCCATCTCATCTTGCTTTTCTGGAAAGCAGGGAGATCATTCTGGTGGAAGGCCTGAAGCTTGATGATGTCCCAGTGGGAGTATATTCACTCAGTTGCTTGCCTCTTAGGTTGGTTCACTCTGAGGCATCACCTATTCGATGCATTCTGAGCAGATGA 831 0.5066 MNSLSLLAFLCAILAHSISVSANSAAYPSIPGVDTDDDCSLRGEGGALVPPRREVYDEGRIFDISHRYVPEMPVWDSTEGLGQDFLWLGTSMKKGWRANNSIFKLGAHTGTHVDAPGHFYDNYYDAGFDVDSLDLTVLNGLSLVVDVPRDKNITAEVMKSLNIPRGVRRVLFRTLNTDRRLMFKKEFDTSYVGFKEDGAKWLVENTDIKLVGIDYLSAAAYDHSVPSHLAFLESREIILVEGLKLDDVPVGVYSLSCLPLRLVHSEASPIRCILSR 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01322 276 Pfam Putative cyclase 62 218 IPR007325 GO:0004061|GO:0019441
Spst10g01322 276 Gene3D Putative cyclase 55 275 IPR037175 GO:0004061|GO:0019441
Spst10g01322 276 FunFam Uncharacterized protein 56 213 - -
Spst10g01322 276 PANTHER CYCLASE-LIKE PROTEIN 2 10 275 IPR007325 GO:0004061|GO:0019441
Spst10g01322 276 SUPERFAMILY Putative cyclase 59 274 IPR037175 GO:0004061|GO:0019441
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01322 Spst-Chr10 13772906 13776826 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01322 - - gmx:100800277 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01322 10 13772906 13776826 Spst10g01322 10 13772906 13776826 ECH