Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01321 ATGCCCCACACCAACTCAAAAATTAAAACAAACCACCCCATCTTCAGCATTTCTGAGTCACAAACCACAAATATGCAGAACCTCAGTTTCCTCTACCTAACCATCATTTCCCTCTCTCTCATCCTCTTCTACAGCACAAACAACATCATCTTAGTCCAAGCCCTGACCTCACCCTCAGACATTGCAGCCCTCAAGGCCTTGAAGGCCTCAATCAAACCTGGGTCCATCCCAGCCTGGTCTTGCCTCGGCTCATGGAACTTCACCACCGACCCGTGCTCACTCCCTCGCCGCAGTAGCTTCCTCTGCGGCCTCACCTGCACCCCTGACTCCACAAGAATCAACCAAATCACTCTCGACCCAGCAGGGTATTCAGGCACACTCACCCCACTAATCTCTCAACTCACACAACTCATCACACTTGACCTCTCCGAAAACAACTTCTTCGGCTCAATCCCCTCTTCAATCTCCTCACTCTCAAACCTCCAAACCTTATCCTTCCGATCCAATTACTTCTCAGGCCCAATCCCTTCCTCCATAACCACCTTAAAATCACTCCAATCTCTTGACTTTTCACATAATTCTCTTTCTGGGTCTCTCCCAAACTCGATGAACTCCCTCACCACACTCCGTAGACTCGATCTCAGCTTCAACAACCTAACCGGTTCAATCCCCAAACTCCCACCCAACTTGCACGAACTCGCGATCAAGGCCAATTCTCTAAATGGGCCTCTCCAGGAACAGAACTTTGAAGGGATGAACCAGTTAGAAGTGGTGGAGCTAAGCAAGAACGCGCTCACCGGAACAGTGGAATCGTGGTTCTTCTCATTACCGTCACTGCAGCAAGTGAACTTGGCCAACAACACCATCACGGGGGTACAGATCTCGCGACCACGCGCGGCGCGTGGGGGAACCGGAAGCAGCAGCAACCTCGTCTCGCTCGACCTCGGGTTTAACAGAATCCAAGGCTACGCGCCCGCTAATCTCTCCGCATTTCCCGCGCTGTCGTTCTTGTCGATTCGCCACAACGCGCTTCGTGGCGCGATCCCTCCCGGGTACGGCCAGATCAAGTCCTTAACGAGGGTGTTCCTCGACGGAAACTTCCTCACCGGAAAGCCGCCGCCGGGGCTTATCGCCACCAGCAGGGAGATTTACGGCAGTCTTGGCGACAATTGTCTGAATTCATGTCCAAATTCGTCTTATCTGTGCTGGCCCGCACAGAAACCAATCTCAGTTTGCAAGCAAGCCTACTACAGGGATAGACCAACACCGTAA 1272 0.5236 MPHTNSKIKTNHPIFSISESQTTNMQNLSFLYLTIISLSLILFYSTNNIILVQALTSPSDIAALKALKASIKPGSIPAWSCLGSWNFTTDPCSLPRRSSFLCGLTCTPDSTRINQITLDPAGYSGTLTPLISQLTQLITLDLSENNFFGSIPSSISSLSNLQTLSFRSNYFSGPIPSSITTLKSLQSLDFSHNSLSGSLPNSMNSLTTLRRLDLSFNNLTGSIPKLPPNLHELAIKANSLNGPLQEQNFEGMNQLEVVELSKNALTGTVESWFFSLPSLQQVNLANNTITGVQISRPRAARGGTGSSSNLVSLDLGFNRIQGYAPANLSAFPALSFLSIRHNALRGAIPPGYGQIKSLTRVFLDGNFLTGKPPPGLIATSREIYGSLGDNCLNSCPNSSYLCWPAQKPISVCKQAYYRDRPTP 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01321 423 Pfam Leucine Rich Repeat 137 158 IPR001611 GO:0005515
Spst10g01321 423 Gene3D Ribonuclease Inhibitor 56 226 IPR032675 -
Spst10g01321 423 ProSiteProfiles Leucine-rich repeat profile. 208 230 IPR001611 GO:0005515
Spst10g01321 423 SMART LRR_typ_2 206 233 IPR003591 -
Spst10g01321 423 SMART LRR_typ_2 276 302 IPR003591 -
Spst10g01321 423 SMART LRR_typ_2 182 205 IPR003591 -
Spst10g01321 423 SMART LRR_typ_2 134 158 IPR003591 -
Spst10g01321 423 Gene3D Ribonuclease Inhibitor 227 407 IPR032675 -
Spst10g01321 423 PRINTS Leucine-rich repeat signature 206 219 - -
Spst10g01321 423 PRINTS Leucine-rich repeat signature 185 198 - -
Spst10g01321 423 FunFam Nuclear pore complex protein NUP107 57 225 - -
Spst10g01321 423 Pfam Leucine rich repeat 159 219 IPR001611 GO:0005515
Spst10g01321 423 Pfam Leucine rich repeat 228 289 IPR001611 GO:0005515
Spst10g01321 423 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 226 414 - -
Spst10g01321 423 SUPERFAMILY L domain-like 131 394 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01321 116 392 Receptor kinase-like Gene Family AT5G46330 29.276 1.84e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01321 - - gmx:100801713 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01321 10 13746239 13747510 Spst10g01321 10 13746239 13747510 ECH