Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01268 ATGACAATACCAAAACGAAGCTATTCTCGAATTGACACATTGGAGCTGAAAGCTCTGATAGTAAGGAAGGTTGGTCATCAGAGAGCTGAGAAGTACTATGATCAGCTTCGAAGATTATTGAGTTCAAAGATAAGCAAGTCAGAGTTTGACAGAATTTGCATGGTGATACTTGGGAGGGAAAATATCCCTCTTCACAATCGACTCATTAGAGCGATTTTGAAGAATGCTTGTCTGGCTAAAGTCCCGCCTGTGAGAGGCTCTGCAAGAACAGGGAGTGCCTTTAGTGTAAAAGTTTCAGATGGTTTGCAAAGAGGCTCTATTCAAACGTTGTTTGGGGACGCGTTTCCCCCTTCCTTGCGGAGGATTGGCCCTTCAGCTGCTCGAGACCGTAGGTGTAAGGGCCGCCAAAATGCTTTGGGGCCGCTGGGGAAACCCCAATTTGGTCTTGCGTCTGAAGAATTGATATGTAAGACACTGGAGCAGCAGAGTGCGACAGAACTGAATTCCCTTGGCAGCAGACCTCCAATATCTGTTGAAGAAGGAGAGGAGGTTGAACAGATTGCTGGAAGCCCCAGTGTTCAAAGTAGGAGCCCGGTTACAGCTCCTCTTGGTATATCCATGAATTTTGTTCGTGGCAGTAGACGTCATTCTAATGTATCGTTATGTAGCAAAGGTTATCCAGAGACTTGTCACAGCAATGGAGATCTCCCTGACACCAGATCTTTGAGGAGTCGTTTAGAGCAAAAGTTGGAGAAGGAGGGTTTAACTGTGACAGTGGATTGTGTAAATCTATTAAATAATGCACTGGATTCATATCTGAAGAGATTGATTGAATCCTTTATGGATTTAGCTGGGTCAAGACGTGGAAATGAGCACCTAAGACAACAGAACAGACAGTTGGCAACCAGTTCAAATGTATTGCTACCTGAAAGATGTATGCAAAAAGCAACTAGATCTGCTGATGCATCTGTTTTAGATTTCCTTCTTGCAATGGAATTAAATCCACTAGTTCTTGGACCAGATTGGCCTATTCAACTTGAGAAGATTTGCGTACGTTCCTCTGAAGAGTGA 1071 0.4398 MTIPKRSYSRIDTLELKALIVRKVGHQRAEKYYDQLRRLLSSKISKSEFDRICMVILGRENIPLHNRLIRAILKNACLAKVPPVRGSARTGSAFSVKVSDGLQRGSIQTLFGDAFPPSLRRIGPSAARDRRCKGRQNALGPLGKPQFGLASEELICKTLEQQSATELNSLGSRPPISVEEGEEVEQIAGSPSVQSRSPVTAPLGISMNFVRGSRRHSNVSLCSKGYPETCHSNGDLPDTRSLRSRLEQKLEKEGLTVTVDCVNLLNNALDSYLKRLIESFMDLAGSRRGNEHLRQQNRQLATSSNVLLPERCMQKATRSADASVLDFLLAMELNPLVLGPDWPIQLEKICVRSSEE 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01268 356 PANTHER TRANSCRIPTIONAL ADAPTER 1 4 355 IPR024738 GO:0070461
Spst10g01268 356 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 7 283 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01268 Spst-Chr10 13406662 13407732 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01268 - - gmx:100817344 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01268 10 13406662 13407732 Spst10g01268 10 13406662 13407732 ECH