Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01261 ATGCAAAAGAGAAAGCTGAAGTGTCAGTTTTGGCGTGCACAACTCAGCAACGTTTTCAAACTTGAACCATATAAAATAAGGGGAAACAGAAAAAAAAGGAATAACAAAAGCATTACAAGTATAGATATAGATATATTCATGCTGGATTTGGAACTTGGAGCTTTAAGGGCACTAGAGGTTGTTAACACTCTGTTGGCTATGTCCCCTGAGCTGACTCGGTGCGCCCGGGCTCCGTGGGCTTTGCCGCCGACCAAGGAAACAATCTCTTCCAACAGACAAACGTGGATTAATCTTGGCTCTGAGTTGGCCCTCAGAGCTGGGCTTGTCTTCTCTTTCCTTTTCTCGGAAATTTTGGCTGCTATATGTGTAGGGATTCGGCCTCAGCTGAGAGGAAGCAGATCTTATATTGTCAAGATGAAGTTCATGAAGCTTGGATCCAAGCCTGATACCTTTCAGACTGATGGGAACAATGTTAGGTATGTGGCAAGTGAGTTGGCGTCAGATGTTGTTGTTAGTGTAGGAGATATAAAGTTTTATTTACATAAGTTTCCTCTCCTGTCAAAGAGTTCTCACTTACAGACATTGATCTCCCTCAATAATGAAGAAAATGTTGATGAAATTCAGATCTCTGACATTCCCGGTGGTGCTAGTACCTTTGAAATATGTGCTAAGTTTTGCTATGGTATGACTGTTACCCTCAATGCTTACAACGTAATAGCAACTAGGTGTGCAGCAGAGTATCTTGGAATGAATGAGACAATCGAGAAAGGGAACCTCGTTTACAAGATTGATGTTTTCCTTAGCTCTAGCATTTTCCGTAGTTGGAAGGATTCAATCATCCTTCTTCAGACTTCAAAGTCTATATTACCCTTGGTTGAGGACCTAAAGGTTGTCAGTCATTGCGTTGATTCTATTGCAAATAAGGCATGTGTTGACATATCCAAAGTTGACTGGTCCTACACCTATAATCGGAAGAAGCTTCCAGAGGAAAATGGGATCGAGTCAAACCAGAGTGGACTTAGAACACGACTGGTGCCAAAGGACTGGTGGGTTGAAGATTTATGCGAGCTTGAAGTTGATTTATACAAGTCTGTGATTACAAATATTAAATCCAAGGCAGTTCAATCCAATGAGGTAATTGGTGAAGCTTTGAAAGCGTATGCTTACAGAAGATTGCCAAATTTCAGCAAGGGTATGATCCAGTGTGGGGATGTGTCAAAGCATCGTGTAATAGTTGAAACTATTGTGTGGTTGTTACCTACAGAGAAAGGAAGTGTTCCTTGTAGGTTCTTACTCAAGTTATTGAAAGCTGCCATTTTTGTCGAATCAGGAGATAGGACTATAGAAGTGCTGGTGAAGAGAATTGGGCAGCAACTGGAGGAGGCTTCTGTAAGTGATATTTTGATTCAAGCACCAGATGGGGTTGCTACAATGTATGACGTTAGTATAGTACAAAACATTGTCAGAGAGTTTTTTATGAAAAATCACAATGCTGAGATTGAATCAGTTGGGGGTGGTGAACTTGAGGGAATAAGAAAACCAGGGATTTTATCAGACGCTTCGAAGCTGATGGTTGCAAAACTCATAGATGGGTACCTTGCTGAAATTGCAAAAGATCCCAGTTTACCTTTGTCAGATTTTGTTAATCTTGCTGAGTTAGTGTCCAGCATCTCTCGTCCAGCTCATGATGGTCTTTATAGGGCTATTGACACATATCTGAAGGAGCACCCTGGAATAAGCAAAGGCGAAAAGAAGAAGATATGCAAGCTGATGGATTGTAGAAAGCTATCAGTTGACGCATGCTTGCATGCAGTGCAAAACGAGAGACTACCATTGCGTGTAGTTGTGCAGGTACTATATTTTGAGCAGTTAAGGACTGCTGCATCATCAGGCGCTAGCACTCCTGACATACCTAGAGGAATCAAAGACTTGAACAATGAGTCCAATGGAAGCTCCAGGTCAGGGACAACTAACCCAGAAGATGAGTTGGATGCTGTGGCCACAGCTGAGGAACTGAAGGCATTAAGAAAGGAACTTGCATCATTGAGGCTGAGCAATGGAGTTGGAAGCAATGACAAAGATGGAGATATCAAACCCAGCATGGACAAAGCTGTCATTGGCAAGGTGAAAGGGTTGCTCAAGTCAAAGAAGTCTTTCATAAAGCTTTGGGCCAGCAAAGGGGGTCAAGGGGAAAATAGTGGCTCAGACTCATCAGAGAGTATTAGTTCTGCTAACCCAGAAGAAGCCAAATCTACTCCTTCCAGAAATAGGAGGCATTCAGTTTCCTGA 2289 0.4229 MQKRKLKCQFWRAQLSNVFKLEPYKIRGNRKKRNNKSITSIDIDIFMLDLELGALRALEVVNTLLAMSPELTRCARAPWALPPTKETISSNRQTWINLGSELALRAGLVFSFLFSEILAAICVGIRPQLRGSRSYIVKMKFMKLGSKPDTFQTDGNNVRYVASELASDVVVSVGDIKFYLHKFPLLSKSSHLQTLISLNNEENVDEIQISDIPGGASTFEICAKFCYGMTVTLNAYNVIATRCAAEYLGMNETIEKGNLVYKIDVFLSSSIFRSWKDSIILLQTSKSILPLVEDLKVVSHCVDSIANKACVDISKVDWSYTYNRKKLPEENGIESNQSGLRTRLVPKDWWVEDLCELEVDLYKSVITNIKSKAVQSNEVIGEALKAYAYRRLPNFSKGMIQCGDVSKHRVIVETIVWLLPTEKGSVPCRFLLKLLKAAIFVESGDRTIEVLVKRIGQQLEEASVSDILIQAPDGVATMYDVSIVQNIVREFFMKNHNAEIESVGGGELEGIRKPGILSDASKLMVAKLIDGYLAEIAKDPSLPLSDFVNLAELVSSISRPAHDGLYRAIDTYLKEHPGISKGEKKKICKLMDCRKLSVDACLHAVQNERLPLRVVVQVLYFEQLRTAASSGASTPDIPRGIKDLNNESNGSSRSGTTNPEDELDAVATAEELKALRKELASLRLSNGVGSNDKDGDIKPSMDKAVIGKVKGLLKSKKSFIKLWASKGGQGENSGSDSSESISSANPEEAKSTPSRNRRHSVS 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01261 762 MobiDBLite consensus disorder prediction 630 662 - -
Spst10g01261 762 MobiDBLite consensus disorder prediction 728 750 - -
Spst10g01261 762 SUPERFAMILY POZ domain 159 255 IPR011333 -
Spst10g01261 762 MobiDBLite consensus disorder prediction 725 762 - -
Spst10g01261 762 Pfam BTB/POZ domain 164 255 IPR000210 GO:0005515
Spst10g01261 762 ProSiteProfiles BTB domain profile. 167 235 IPR000210 GO:0005515
Spst10g01261 762 Coils Coil 665 685 - -
Spst10g01261 762 ProSiteProfiles NPH3 domain profile. 348 625 IPR027356 -
Spst10g01261 762 Pfam NPH3 family 348 601 IPR027356 -
Spst10g01261 762 Gene3D Potassium Channel Kv1.1; Chain A 142 259 IPR011333 -
Spst10g01261 762 MobiDBLite consensus disorder prediction 644 661 - -
Spst10g01261 762 PANTHER OS12G0117600 PROTEIN 161 739 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01261 Spst-Chr10 13372976 13379001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01261 146 631 EF-hand Containing Proteins AT3G44820 35.509 3.74e-99 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01261 - - gmx:100807318 1135.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01261 10 13372976 13379001 Spst10g01261 10 13372976 13379001 ECH