Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01252 ATGAAGCTTCGGATATCTTTGCTCTGCGTCTTTCTAGGGTTTCTGGTGCTGTTCCTGTCGCCGCCGTCAATGGCGAAATTCGTGGTAGAGAAGAACAGCTTGACGGTTACGTCGCCAGACAACATCAAGGGCACGCACGATAGCGCGATTGGAAACTTCGGGATACCCCAATACGGAGGCAGCATGGCTGGAAACGTGGTGTACCCCAAGGACAACAAAAAAGGTTGCAAGGAGTTCGATGAGTATGGGATTTCCTTCAAATCCAAACCCGGTTCTCTTCCCACTATCGTTTTGCTCGATCGAGGAAATTGCTTCTTTGCTTTGAAGGTATGGAATGCACAGAAGGCTGGAGCTTCTGCTGTTCTTGTTGCAGATGACATTGAGGAAAAGTTGATAACCATGGACACTCCTGAAGAGGATGGGTCATCTGCGAAATACATAGAGAACATAACAATACCATCTGCCCTCATTGAAAAGAGTTTTGGTGGAAAGTTAAAGGATGCCATAAGTAATGGGGATATGGTCAATGTAAATCTTGATTGGAGAGAGGCTGTTCCCCACCCGGATGATCGTGTGGAGTATGAATTGTGGACCAACAGCAATGATGAGTGTGGAGTTAAATGTGATATGTTGATGGAATTTGTGAAGGATTTTAAGGGTGCGGCACAGATATTGGAGAAAGGTGGTTATACTCAATTTACGCCCCATTATATAACTTGGTACTGTCCTCAGGCATTCACATTGAGCAAACAGTGCAAGTCCCAGTGCATAAATCATGGGAGATATTGTGCTCCAGATCCTGAGCAGGATTTCAGCACTGGTTACGATGGAAAGGATGTGGTTATTGAAAATTTAAGGCAGCTTTGTGTTTTCAAGGTGGCAAATGAAACCAAAAAGCCTTGGGTGTGGTGGGATTATGTCACTGATTTTCAAATTAGATGCCCAATGAAGGAGAAAAAATACAACAAGAAATGTGCAGATGCTGTCATTGAATCTCTTGGCCTTGATATTAAAAAGATTGAAAGGTGCATGGGAGATCCGAATGCTGATTCTGAAAATCCTGTTTTGAAAGAAGAGCAAGATGCCCAGGTTGGGAAGGGGTCACGAGGTGATGTTACCATATTGCCTACTCTAGTTGTCAACAATAGACAGTATCGAGGAAAATTGGAGAAAGGTGCTGTTATGAAAGCTATTTGTGCTGGTTTTGAAGAAACTACTGAACCAGCTGTTTGTTTGAGCAGTGGTAAATGTTTACTTTCTTTTGGTTCTGCAAAGAGAAACTAG 1284 0.433 MKLRISLLCVFLGFLVLFLSPPSMAKFVVEKNSLTVTSPDNIKGTHDSAIGNFGIPQYGGSMAGNVVYPKDNKKGCKEFDEYGISFKSKPGSLPTIVLLDRGNCFFALKVWNAQKAGASAVLVADDIEEKLITMDTPEEDGSSAKYIENITIPSALIEKSFGGKLKDAISNGDMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMEFVKDFKGAAQILEKGGYTQFTPHYITWYCPQAFTLSKQCKSQCINHGRYCAPDPEQDFSTGYDGKDVVIENLRQLCVFKVANETKKPWVWWDYVTDFQIRCPMKEKKYNKKCADAVIESLGLDIKKIERCMGDPNADSENPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLEKGAVMKAICAGFEETTEPAVCLSSGKCLLSFGSAKRN 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01252 427 CDD PA_VSR 52 179 - -
Spst10g01252 427 MobiDBLite consensus disorder prediction 349 368 - -
Spst10g01252 427 FunFam Vacuolar-sorting receptor 1 24 188 - -
Spst10g01252 427 MobiDBLite consensus disorder prediction 349 365 - -
Spst10g01252 427 Pfam PA domain 63 162 IPR003137 -
Spst10g01252 427 PANTHER PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 8 414 - -
Spst10g01252 427 SUPERFAMILY PA domain 32 149 IPR046450 -
Spst10g01252 427 Gene3D - 24 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01252 Spst-Chr10 13328157 13330592 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01252 25 422 Miscellaneous Gene Families AT2G14740 84.080 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01252 - - gmx:100803958 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01252 10 13328157 13330592 Spst10g01252 10 13328157 13330592 ECH