Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01248 ATGAAGGTTGGTACAGAAGCCTGCAGCTTGTTGTTCATTACCATTCTCCTTTCACTGATCTCAGGGCTTGGCGTCCATTCTTTATCTTATGATTATTCTGCCACTACGAAGTGCTTGGCAGAACCTGAGAGAGCACAGTATGGAGGAGGCATTATAGTAAATCCAGGATTTGATCACAACATAGAGGGTTGGTCAGTGTTTGGAAAAGGGTCAATCAAGGAACGAATATCGAATGAAGGCAATAGATTTATTGTTGCTCACAATAGAACACAACCGTTGGATTGTTTCTCTCAGAAGGTCCAACTTAGGAAAGGAATGCTATACACCTTTTCTGCTTGGTTTCAGGTCAATGAAGGAAGTGACATAGTGTCAGTCGTATTTAAAACAAAAGGAACTGAACTGTTACGAGGTGGTCAAGTGATAGCAAACCATGGATGCTGGACCCTTCTAAAAGGCGGCATAGCTGCAAACTTTTCAAGCCCTGTTGAAATTCTATTTGAGAGCAAGAATTCAACAGTGGATATATGGGCTGACAATATCTCGTTACAACCATTCTCTAAGAAGCAGTGGAGATCACTACAAGATGCCAGCATTGAGAGGGTACGTAAGAGGAGAGTGAGATTCCAGATAACTCATGTAAATGAAACAGCATTGAAAGGAGCTACAGTCATCGCCAGACCAGTGAAGTTGAACTTCCCGTTTGGATGTGGAATGAACCATTATATCCTCACAAACAAAGACTACCAGAATTGGTTCGTGTCAAGGTTCAAATATGCAACCTTCACCAATGAGATGAAGTGGTATAGTACAGAGAAAAAGCAAGGCGTGGAAAACTATACGATCTCAGATGCCATGCTGAAATTTACCAAAGAAAATGGCATTTCTGTGAGAGGCCATAACATTTTCTGGGACGATCCAAAATATCAGCCTGAATGGGTCAAAACCCTAACACCTGGGGATTTAAAGAAAGCAGCAGCAAAAAGAATGGAATCTGTTGTTTCAAGATACAGAGGGCAACTGATTGCATGGGATGTGATGAATGAGAACCTTCACTTCCACTTCTATGAGGACAAGTTAGGCGAAAATGCTTCTGCAGAAGCATATGCAACAGCTTACGAGCTTGATCCAAAGCCAAAGATGTTCCTGAATGAGTATAACACCATTGAATATAGTGGGGACGAGGCTTCCAGCCCTGGCAACTATATGAACAAAATTAAGGAGATTCTGTCATTTCCAAGAGCTGCTGGAATGTCAGCAGGAATAGGGTTGCAAGGCCATTTTGCTAGTGGCCAGCCAAATCTTGCTTACATGAGGTCAGGTCTTGATCTTCTTGCTACAGCTGGACTTCCAATATGGCTCACAGAAGTGAGTGTGGATCCACAACCAAGTCAGGCAGAGTACTTGGAAGAGGTACTAAGAGAGGGGTACTCTCATCCTGCAGTTGAAGGGATTATAATGTTTTCGGGTCCAGCACAAGCTGGTTTCAATGCCACTACTCTTGCGGATGAGAATTTCAAAAATACTCCTGCTGGTGACGTTGTGGACAAGCTCATTCAGGAGTGGGGAACTGGGCCTAATACTGCCACAGCAGATGGCAGAGGAATTGTAGATATTTCTCTGCACCATGGAGATTATGATGTAACTGTTACACATCCTCTCATTCACTCCCCTGTAACAATGAATCTAACTGTAAAGAAAGATTTTTCACTGCGAACCATTCATCTGAAAATGCGTACATAA 1740 0.427 MKVGTEACSLLFITILLSLISGLGVHSLSYDYSATTKCLAEPERAQYGGGIIVNPGFDHNIEGWSVFGKGSIKERISNEGNRFIVAHNRTQPLDCFSQKVQLRKGMLYTFSAWFQVNEGSDIVSVVFKTKGTELLRGGQVIANHGCWTLLKGGIAANFSSPVEILFESKNSTVDIWADNISLQPFSKKQWRSLQDASIERVRKRRVRFQITHVNETALKGATVIARPVKLNFPFGCGMNHYILTNKDYQNWFVSRFKYATFTNEMKWYSTEKKQGVENYTISDAMLKFTKENGISVRGHNIFWDDPKYQPEWVKTLTPGDLKKAAAKRMESVVSRYRGQLIAWDVMNENLHFHFYEDKLGENASAEAYATAYELDPKPKMFLNEYNTIEYSGDEASSPGNYMNKIKEILSFPRAAGMSAGIGLQGHFASGQPNLAYMRSGLDLLATAGLPIWLTEVSVDPQPSQAEYLEEVLREGYSHPAVEGIIMFSGPAQAGFNATTLADENFKNTPAGDVVDKLIQEWGTGPNTATADGRGIVDISLHHGDYDVTVTHPLIHSPVTMNLTVKKDFSLRTIHLKMRT 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01248 579 Gene3D Glycosidases 223 525 - -
Spst10g01248 579 Pfam Glycosyl hydrolase family 10 229 466 IPR001000 GO:0004553|GO:0005975
Spst10g01248 579 SUPERFAMILY (Trans)glycosidases 219 524 IPR017853 -
Spst10g01248 579 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 224 517 IPR001000 GO:0004553|GO:0005975
Spst10g01248 579 PANTHER GLYCOSYL HYDROLASE 28 566 IPR044846 GO:0004553|GO:0005975
Spst10g01248 579 SMART glyco_10 265 517 IPR001000 GO:0004553|GO:0005975
Spst10g01248 579 Pfam Carbohydrate binding domain 50 152 IPR003305 GO:0016798
Spst10g01248 579 Gene3D - 39 185 - -
Spst10g01248 579 SUPERFAMILY Galactose-binding domain-like 48 185 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01248 Spst-Chr10 13292868 13296200 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01248 26 567 Glycoside Hydrolase AT4G33840 49.174 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01248 - - gmx:100777980 1025.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01248 10 13292868 13296200 Spst10g01248 10 13292868 13296200 ECH