Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01247 ATGAGTGAAAAGATGAAGAAGGTTTCTGCAGAATTAGGTTTCTGCAGACTTATTTGCCTCTTACTGATCTCAGGCTATGGCGTCCATTCTATGTCTTATGATTATTCTGCTACTACAGAGCAGTGCTTGGCAGAACCTGAGAGAGCACAGTATGGAGGAGGCATTATAGTAAATCCAGGATTTGATCACAACATAGAGGGTTGGTCAGTGTTTGGAAAAGGGTCAATCAAGGAACGAATATCGAATGAAGGCAATAGATTTATTGTTGCTCACAATAGAACACAACCGTTGGATTGTTTCTCTCAGAAGGTCCAACTTAGGAAAGGAATGCTATACACCTTTTCTGCTTGGTTTCAGGTCAGTGAAGGAAGTGACATAGTGTCAGTCGTATTTAAAACAAAAGGAAGTGAACTGGTACGAGGTGGTCAAGTGATAGCAAAGCATGGATGCTGGACCCTTTTAAAAGGCGGCATAGTTGCAAACTTTTCAAGCCCTGTTGAAATTCTTTTTGAGAGCAAGAATTCAGCTGTGGAAATATGGGCTGACAATGTTTCCTTACAACCATTCACTGAAAGGCAGTGGAGAGCAGAACAAGACGCCAGCATTGAGAAGGTACGTATGAGGAAAGTGAGATTCCAGATAACCAATGAAAATGGAACAGCACTGAAAGGAGCTACAGTCATCCCAAACGCAGCAAAGTTGAACTTCCCATTTGGATGTGCAATGAACAATTTTATCCTCACAAGCAAAGACTACCAGAACTGGTTTACGTCAAGATTCAAATTCACAACTTTCACCAATGAGATGAAGTGGTATAGTACGGAGAGAACACAAGGCCAGGAAAACTACAGTACCGCAGATGACATGCTGAAATTTGCCAAAGAGAATGGCATTTCTGTGAGAGGCCATAACATTTTGTGGGACGATCCAAAATATCAGCCCGAATGGGTCAAGACCCTAACACCTACAGATTTAAAGAAAGCAGCAGCAAAAAGAATGGAATCTGTGGTTTCAAGATACAAAGGGCAACTGATTGCATGGGATGTGATGAATGAGAATCTTCACTTCCACTTCTATGAGGACAAACTCGGCCAGAATGTCTCTGCAGAAGCGTATGCAACAGCTTTCGCGCTGGATCCACAGACAAAGATGTTCCTGAATGAGTTTAACACCATTGAATATAGTGGGGATCAGGAAGCCAGCCCTGCCAAATATTTACAGAAAATTAAGGAGATTCTGTCATTTCCAGGAGTTGCTGGAATGTCAGCAGGAATAGGGTTGCAAGGCCATTTTGCTAGTGGCCAGCCAAATCTTGCTTACATGAGGTCAGGTCTTGATCTTCTTGCTGCAACTGGACTTCCAATATGGCTCACGGAAGTGACTGTGGATCCACAACCAAGTCAGGTACTAAGAGAGGGGTACTCTCATCCTGCTGTTGCAGGGATTATAATATTTGCTGGTCCAGAACAAGCTGGTTTCGCGCAAACTACTCTGGTGGATCAGAATTTCAAAAATACTCCAGCTGGGGATCTTGTGGACAAGCTCATTAAGGAGTGGGGAACTGGGCCTAAGATTGCCACAGCAGATGGCAGAGGAATAGTAGAGATTTCACTGCACCATGGAGATTATGATGTAACTGTTACACATCCTCTAATCCACTCCCCTATAAAGTTGAATCTAACCATTGGCAAGGGTAGATCAAAGAAGGAGGCACGAACTAGCAGCTTCCGTGGCGGACACCTGCCTATCAGATTACTTCTAGTCGCTCTAGTGATTGAAACTACAGAGCAAATGATGAAGTGTATAGGTAAAAGAATGGAGCTCTGGTGCTTGGAACTATCCCATAGGAAAGTTGCAAGTTTGTTTATGTTGTTGTTTGCGTATAAGCTAGAAGAAAGGAAGTACACTGGTGTATCTGAAATGTAG 1926 0.4304 MSEKMKKVSAELGFCRLICLLLISGYGVHSMSYDYSATTEQCLAEPERAQYGGGIIVNPGFDHNIEGWSVFGKGSIKERISNEGNRFIVAHNRTQPLDCFSQKVQLRKGMLYTFSAWFQVSEGSDIVSVVFKTKGSELVRGGQVIAKHGCWTLLKGGIVANFSSPVEILFESKNSAVEIWADNVSLQPFTERQWRAEQDASIEKVRMRKVRFQITNENGTALKGATVIPNAAKLNFPFGCAMNNFILTSKDYQNWFTSRFKFTTFTNEMKWYSTERTQGQENYSTADDMLKFAKENGISVRGHNILWDDPKYQPEWVKTLTPTDLKKAAAKRMESVVSRYKGQLIAWDVMNENLHFHFYEDKLGQNVSAEAYATAFALDPQTKMFLNEFNTIEYSGDQEASPAKYLQKIKEILSFPGVAGMSAGIGLQGHFASGQPNLAYMRSGLDLLAATGLPIWLTEVTVDPQPSQVLREGYSHPAVAGIIIFAGPEQAGFAQTTLVDQNFKNTPAGDLVDKLIKEWGTGPKIATADGRGIVEISLHHGDYDVTVTHPLIHSPIKLNLTIGKGRSKKEARTSSFRGGHLPIRLLLVALVIETTEQMMKCIGKRMELWCLELSHRKVASLFMLLFAYKLEERKYTGVSEM 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01247 641 Gene3D - 44 189 - -
Spst10g01247 641 SMART glyco_10 269 514 IPR001000 GO:0004553|GO:0005975
Spst10g01247 641 Pfam Glycosyl hydrolase family 10 230 467 IPR001000 GO:0004553|GO:0005975
Spst10g01247 641 PANTHER GLYCOSYL HYDROLASE 31 567 IPR044846 GO:0004553|GO:0005975
Spst10g01247 641 Gene3D Glycosidases 225 522 - -
Spst10g01247 641 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 228 515 IPR001000 GO:0004553|GO:0005975
Spst10g01247 641 SUPERFAMILY Galactose-binding domain-like 52 187 IPR008979 -
Spst10g01247 641 Pfam Carbohydrate binding domain 54 164 IPR003305 GO:0016798
Spst10g01247 641 SUPERFAMILY (Trans)glycosidases 222 522 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01247 Spst-Chr10 13285349 13291064 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01247 29 577 Glycoside Hydrolase AT4G33840 50.714 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01247 - - gmx:100777980 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01247 10 13285349 13291064 Spst10g01247 10 13285349 13291064 ECH