Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01229 ATGAACGAATTTAAGCACTGCGAGACACAAGATCAAGCGAGAATTGAGAGAGAAAGAGCACGCGACACAGAATCAAACACGATGAAGCTCAGACTCAGATCCTTGGAATCCAAAGAAACCCTCAAAATCAACGTCCCAAATTCCTGTTCTCTGCAGGAACTCATCGATACCGTTTCTCAAACCATCACCTCTTCTTCCTCTTCTCTGCACCTTTCCCTCAATAGAAAGGACGAAATCCGCGCCACTTCGCCGCACGACTCTCTTCACTCCCTTGGCGTTGCCGCCGGCGATCTCATCTTCTACTCTCTCAACCCCACCGCCTTCTCCCCCGAAGCCCTCCCCCATAAGTCAGAAACCGCTTCCCGCGACGGACCCACCATCCAAAAATCGCCGAAAACCCTCGACGGCGATGCCCCCTCCATCCCCGCTCCGCAAAAGTCTCCGAATTTGGACTCCACAGAGGTGGAAACCGTCGAAATGATTGATGGGTCTGACGAGGCGGTGGTGGTGAGTACCAATTCAGAGCCTTTCTTTGTGAGAAGGGTTCTTAAGGAAGCCCTCGGAGAAAACGTTAGTAATTTCAAGCTGTTAGTGCTTACGGTTCACGGTGTGATTCTTGAATCCGGGTTTGTTAGAATTGACAAGGACTCAGGTACGGCGGTTAGTGGTTTTCACCTTTTTGATGATTCTCATTCGCCGTTTTCTTCGGTGATATCGTTGAGGTACACTCTGGCTGATATTCTGGCTAATGGTGCTTCTCATAGTGTGAATTTGAAATTTCAGACACTGGGGCAATTTGTGAATGTATGTGGGTCGTTGTATGATGATAATGGGTCGAGGTTGCACAATGTTTGTTTGGATAGATGTAAATATGTTAAGGCTTTAGAGTTGATGCTGGCAAATTCTGAATCTAAGGGCAGTGTAATTGACGGGGATGATATTGTCTTTGGGAACGAAGTTTTTGAAATGTGGAAGTTGGTAAAAGATAGACTTGCACTGCCACTGTTGATTGATCTTTGTGAAAAGGCTGGGTTGGATCTTCCACCCTGTTTCATGCGGCTACCGATGGAGCTTAAGATCTTGATTTTGGAGCGTCTTCACGGTATTGATTTGGCCAATGTGGCTTGCACCTGTTCAGAGTTGCGATACCTGTCCTCCAGCAATGAGTTGTGGAAGAAGAAGTATTTGGAAGAGTTTAGACAAGGAAGAGATATTAGAGGGTGGCTTTTCAAGGATTTGTTTGGTGTCACCTGGCAAGCCAAAAAGAGGTGGCTTGGGGTTCCTTTTGGACGACGTGGAATTACAAGAAACTTTATTCTCCCACCCAATCCTCTTAGACTGCCTCCTGCTCCAATTCGGGGTGGAGAATATGGTATGCAGCCAGTCTTCTGTGTTGCATTCCCTAGATATCAACCAAGGCGGATTATCATTCCCCCGTGTATATTGAGAGATTTCAATCCATAA 1464 0.4672 MNEFKHCETQDQARIERERARDTESNTMKLRLRSLESKETLKINVPNSCSLQELIDTVSQTITSSSSSLHLSLNRKDEIRATSPHDSLHSLGVAAGDLIFYSLNPTAFSPEALPHKSETASRDGPTIQKSPKTLDGDAPSIPAPQKSPNLDSTEVETVEMIDGSDEAVVVSTNSEPFFVRRVLKEALGENVSNFKLLVLTVHGVILESGFVRIDKDSGTAVSGFHLFDDSHSPFSSVISLRYTLADILANGASHSVNLKFQTLGQFVNVCGSLYDDNGSRLHNVCLDRCKYVKALELMLANSESKGSVIDGDDIVFGNEVFEMWKLVKDRLALPLLIDLCEKAGLDLPPCFMRLPMELKILILERLHGIDLANVACTCSELRYLSSSNELWKKKYLEEFRQGRDIRGWLFKDLFGVTWQAKKRWLGVPFGRRGITRNFILPPNPLRLPPAPIRGGEYGMQPVFCVAFPRYQPRRIIIPPCILRDFNP 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01229 487 MobiDBLite consensus disorder prediction 112 152 - -
Spst10g01229 487 Gene3D - 351 427 - -
Spst10g01229 487 Gene3D - 25 102 - -
Spst10g01229 487 Pfam F-box-like 353 396 IPR001810 GO:0005515
Spst10g01229 487 SMART fbox_2 354 394 IPR001810 GO:0005515
Spst10g01229 487 PANTHER F-BOX PROTEIN SKIP22 28 475 - -
Spst10g01229 487 MobiDBLite consensus disorder prediction 1 23 - -
Spst10g01229 487 CDD F-box_AtSKIP22-like 350 395 - -
Spst10g01229 487 Gene3D - 176 350 - -
Spst10g01229 487 ProSiteProfiles F-box domain profile. 348 394 IPR001810 GO:0005515
Spst10g01229 487 SUPERFAMILY F-box domain 348 412 IPR036047 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01229 K10293 - gmx:100778313 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01229 10 13070779 13072242 Spst10g01229 10 13070779 13072242 ECH