Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01224 ATGGTTTTGAAGTCAATGGTTGCTTCAGCTAGCAATCTAAGTCTAGTGAATTTTGCTGGGAACCCTCTCTTCTTTTCCAAGAATCGGGTTTTCGGTTGTCGAGTTGTTAGCCTCGAATTTTGTTTCAACAAAGGGAGATGGAAGGGGAGCGGAAGTCTTAACAACTTCAAGGTCCGTGCTGCTGTGGAATTGGGAGTGGAGGGATCGAAAAGTAAGGCTTCGGATGCTACTTCTGTGCTGGACGTGGTTTCAGAGGGAGAATTAACAGTGAAGGGGTTTGCGGGGTTGAGGAAGACCAAACTCGTGTGCACAGTTGGTCCTTCTTGCAGTTCTTTGGAGGAACTTGAGAATTTGGCCCTAGGAGGCATGAGTATTGCCAGGCTCAACATGTGTCATGGCACCAGGGAATGGCACCGTGATGTGATTAGGAAGATCAAGAAGTTAAATGTGGAGAAAGGGTTTTGTATTTCTGTGATGATTGACACTGAGGGAAGTCAGATTCATGTTATTGATCATGGAGCCTCATCCTCGGTTAAAGTAGAGGAAGGTTCAATTTGGCATTTTACTGCTGAGCATTTTGAGGGTTCTCGCCCATTCACAGTTCAGACAAACTACAGAGGTTTTTCTGAAGATATTGAAGTGGGTGATGAACTGGTTATTGATGGTGGAATGGCTTGCTTTGAAGTCATTGAAAAGATAGGGAATGATTTGCATTGTAAGTGCATCGATGCTGGTCTTTTGCTTCCTGGAGCCAAATTTAGCTTCTGGAGAGATGGAAAGCTTGTTGGGAGGAATTACAAGCTCCCCACTCTATCAACTAAGGATTGGGCTGACATTGACTTTGGTATAGCTGAGGGTGTTGATTTTTTTGCTTTATCCTTTGTCAATGATGCTGATTCTGTTAAGGATCTAAAGAACTATCTCTCTACGAAGTCAACAAAATCCATTAAAGTTTTGGCAAAGATAGAAAGCTTAGAATCTCTTCATAAACTTGAAGAAATAGTGCGAGCTTCTGATGGAATCATGGTGGCTCGGGGTGACCTTGGGGTCGAAATACCACTTGAACAGATTCCTACGGTCCAAGAGGATATAATTTACGTATGCAGACAACTAAACAAGCCAGTGATTGTAGCTTCTCAGCTTCTTGAGTCAATGGTCGAGTATCCAACCCCAACACGTGCCGAGGTAGCAGATGTTTCTGAAGCAGTTCGACAGTATGCTGATGCTTTGATGTTGTCTGGTGAATCAGCTATTGGGTCATATGGACGTAAAGCTTTGGCAGTCTTGGATATGACTAGCAGTAGAATGGAATCATGGAATAGGGAGGAGAACAGACAAAGTCTTCTCAACCAACACCAACTAGGAGTATCATTGCCAGAATGCATCACTGAGCAAATATGCAATTGTGCTGTTGAAATGGCAAACAACCTTGGTGTTGATGCCATCTTTGTGTACACAAAGCATGGACACATGGCATCACTTCTATCACGCAACCGCCCAAATCCTCCCATCTTTGCCTTCACCAACGACGAAAGTACCCGCATGGCTCTGAATCTGCAATGGGGGGTTGTACCCCTTCTGCTTGATCTATCGGATGATGCTGAATCTAACATCTCAAAGTCAGTCCAACTTATGGAATCCAAAGGATTGATCAGCCAAGGAGATGTTGTTCTAGTGGTCTCAGATATTGCTCCTACCCGTTCCACTCCTGTCGCTCTCCAATCAATTCAGGTGAAGACTATTATCTAA 1749 0.4397 MVLKSMVASASNLSLVNFAGNPLFFSKNRVFGCRVVSLEFCFNKGRWKGSGSLNNFKVRAAVELGVEGSKSKASDATSVLDVVSEGELTVKGFAGLRKTKLVCTVGPSCSSLEELENLALGGMSIARLNMCHGTREWHRDVIRKIKKLNVEKGFCISVMIDTEGSQIHVIDHGASSSVKVEEGSIWHFTAEHFEGSRPFTVQTNYRGFSEDIEVGDELVIDGGMACFEVIEKIGNDLHCKCIDAGLLLPGAKFSFWRDGKLVGRNYKLPTLSTKDWADIDFGIAEGVDFFALSFVNDADSVKDLKNYLSTKSTKSIKVLAKIESLESLHKLEEIVRASDGIMVARGDLGVEIPLEQIPTVQEDIIYVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGSYGRKALAVLDMTSSRMESWNREENRQSLLNQHQLGVSLPECITEQICNCAVEMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTNDESTRMALNLQWGVVPLLLDLSDDAESNISKSVQLMESKGLISQGDVVLVVSDIAPTRSTPVALQSIQVKTII 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01224 582 FunFam Pyruvate kinase 165 269 - -
Spst10g01224 582 Pfam Pyruvate kinase, barrel domain 97 438 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst10g01224 582 ProSitePatterns Pyruvate kinase active site signature. 316 328 IPR018209 GO:0004743|GO:0006096
Spst10g01224 582 Gene3D - 165 269 IPR015806 GO:0004743|GO:0006096
Spst10g01224 582 NCBIfam pyruvate kinase 97 567 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst10g01224 582 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 91 439 IPR015813 GO:0003824
Spst10g01224 582 SUPERFAMILY PK beta-barrel domain-like 167 253 IPR011037 -
Spst10g01224 582 Gene3D - 437 563 IPR036918 -
Spst10g01224 582 SUPERFAMILY PK C-terminal domain-like 459 564 IPR036918 -
Spst10g01224 582 FunFam Pyruvate kinase 270 436 - -
Spst10g01224 582 PRINTS Pyruvate kinase family signature 395 413 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst10g01224 582 PRINTS Pyruvate kinase family signature 414 430 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst10g01224 582 PRINTS Pyruvate kinase family signature 287 301 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst10g01224 582 PRINTS Pyruvate kinase family signature 154 170 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst10g01224 582 PRINTS Pyruvate kinase family signature 318 344 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst10g01224 582 PRINTS Pyruvate kinase family signature 370 394 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst10g01224 582 PRINTS Pyruvate kinase family signature 345 369 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst10g01224 582 FunFam Pyruvate kinase 432 572 - -
Spst10g01224 582 PANTHER PYRUVATE KINASE 80 562 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Spst10g01224 582 Gene3D - 97 436 IPR040442 -
Spst10g01224 582 Pfam Pyruvate kinase, alpha/beta domain 464 563 IPR015795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01224 Spst-Chr10 13035466 13040348 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01224 K00873 - gmx:100780644 1006.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01224 10 13035466 13040348 Spst10g01224 10 13035466 13040348 ECH
Spst2g00518 2 4173028 4173875 Spst10g01224 10 13035466 13040348 PCT