Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01058 ATGGAGAATACAGCCCTTAAAGTTCGATGCCAGAGGATTGGGTGCGAGGCCACCTTCTCCGAGGACGACAACCCAGATGGTTCCTGTCGATACCATGATTCGCCTATATTTCATGATGGAACGAAAGAATGGAGTTGTTGCAAGAAAAGAAGTCATGATTTTAGCTTGTTTATGGAAATCCCAGGATGTAAGACAGGAAAACATACAGCAGTTAAGCAAGTAATTGCCCCCGTGAAGAAGAAGACCGAGCCCTCTCCAACTGCTGTTTCTTCAACCAATGCTTCATCAAAGGACTCTTGTTCCAGATGCCGGCAGGGTTTCTTTTGCTCAGATCATGGTTCACAAAGCAAACCTGTAAATGTTGTTGGAGAGAAGCCCGCAAATCTGTCTGGAGATGCCTCTGCTGTTAACAATTCAAGTGTTCAGGCTCCGAAACAGAAGAAGATAGTCGATATAAATGAACCCCAACTATGTAAAAATAAAGGATGTGGTCAAACATTCAAGGAAAAGGATAATCATGACACGGCTTGCAGCTACCATCCTGGCCCCGCTGTTTTTCATGACCGGGTGAAAGGGTGGAAGTGCTGTGATATTCATGTAAAAGAATTTGATGAGTTTATGACCATTCCTCCTTGCACAAAGGGATGGCATAATGCGGATCCAGAGTCCTGA 672 0.4449 MENTALKVRCQRIGCEATFSEDDNPDGSCRYHDSPIFHDGTKEWSCCKKRSHDFSLFMEIPGCKTGKHTAVKQVIAPVKKKTEPSPTAVSSTNASSKDSCSRCRQGFFCSDHGSQSKPVNVVGEKPANLSGDASAVNNSSVQAPKQKKIVDINEPQLCKNKGCGQTFKEKDNHDTACSYHPGPAVFHDRVKGWKCCDIHVKEFDEFMTIPPCTKGWHNADPES 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01058 223 ProSiteProfiles CHORD domain profile. 10 68 IPR007051 -
Spst10g01058 223 Pfam CHORD 157 217 IPR007051 -
Spst10g01058 223 Pfam CHORD 9 68 IPR007051 -
Spst10g01058 223 Gene3D - 1 72 - -
Spst10g01058 223 Gene3D - 150 220 - -
Spst10g01058 223 PANTHER CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN RAR1 4 222 IPR043316 -
Spst10g01058 223 MobiDBLite consensus disorder prediction 84 100 - -
Spst10g01058 223 ProSiteProfiles CHORD domain profile. 158 217 IPR007051 -
Spst10g01058 223 MobiDBLite consensus disorder prediction 77 100 - -
Spst10g01058 223 FunFam Cysteine and histidine-rich domain-containing protein RAR1 149 220 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01058 K13458 - gmx:100194419 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01058 10 11298480 11302408 Spst10g01058 10 11298480 11302408 ECH