Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01056 ATGCTTCCCAAATCAATTCACCCCTCACTGGAACCTCAACCCAAAACACTTCACACCAAACCCACCCTCACTTCCCTCACCTCCCTCCTCAAACCTCGTTTCGCCCCCCAAAACCCTCACGCATGGATTCTGTTCTCCGTCCTCTTCATCCAGATCCTCCTCCTCTGCAACTTCCGCAGCTTCCCCACTTCAATTCCCACTCCTCTCCCCGCCGCTACTGTCCACCACTCTTCCCAAACCCTAGACCAATGCGCCTCCGGCAAGGTCTTCGTCTACGACCTCCCCCAACCCTTTAACTACGAAATCCTCCAGAATTGCGACAACCTCAATCCCTGGAGTTCCCGCTGCGACGCCCTCTCCAACCACGGGTTCGGCCGGAGCGCCGCCGCTCTCGCCGGAATCGTCCCTGATGATCTCCTCCCGGCGTGGCACTGGACGGACCAGTTCGTCACCGAAATCATCTTCCACGACCGATTATTAAACCACAGGTGTAGGGTTATGGAGCCGGAATCCGCTACGGCGTTTTACGTACCATTCTACGCTGGACTCGCGGTGGGGAAGTATCTCTGGTTAAACTCAACCGCAGAGGAACGCGATCGCCACTGCAACATGATTCTGCGCTGGGTTATGGACCAACCTTTTTTTAAAAGATCAAACGGTTGGGATCATTTTATTACCATGGGGCGCATCACGTGGGATTTTCGCCGCTCCAGGGACCGCGATTGGGGTTCTAGCTGCATCCACAAGCCTGGGATAAGAAACGTCACGCGCCTTCTCATTGAGCGCAACCCTTGGGACTATTTTGACGTCGGTGTTCCCTACCCCACCGGATTCCACCCGCGCTCCAAATCCGACGTCACGCACTGGCAGAACTTCGTCCGCGCGCGCCACCGCAACGCGCTCTTCTGCTTCGCCGGCGCGCCTCGCCGCGCGTTCCGCGACGACTTCCGCGGGGTTCTGCTGAGTCAGTGCCGCGACTCGGGCGAGTCGTGCCGCACCGTGAATTGCACCGGGACGCGGTGCTCCAACGGCACGTCGGCGATTCTCGAAACGTTTCTCGACTCGGATTTCTGCTTGCAGCCAAGAGGAGACAGCTTCACGCGCAGGTCCATTTTCGATTGCATGGTGGCTGGTTCGATTCCGGTTTTCTTCTGGCGGCGAACCGCGTACGTGCAGTATGAATGGTTCTTGCCAAGGGAACCGGGCAGTTACTCGGTTTACATAGACCATAACGCAGTGAGGAATGGAACCGTAACCGTGAAAAACGTGCTTGAGAAGTTCACCAAGGAGGAAGTGAGGCAAATGAGGGAGAAAGTGATCGAGTACATTCCGCGGTTGATTTACGCCAACGCGAAAGAAGGGTTAGAGGGTATGAAGGATGCCTTCGATGTTGCCATCGAAGGTGTCTTCAAAAGGTTTGAAAAACAGGAACAACCCCAGTTTCATAAGTGGAAATAA 1458 0.5562 MLPKSIHPSLEPQPKTLHTKPTLTSLTSLLKPRFAPQNPHAWILFSVLFIQILLLCNFRSFPTSIPTPLPAATVHHSSQTLDQCASGKVFVYDLPQPFNYEILQNCDNLNPWSSRCDALSNHGFGRSAAALAGIVPDDLLPAWHWTDQFVTEIIFHDRLLNHRCRVMEPESATAFYVPFYAGLAVGKYLWLNSTAEERDRHCNMILRWVMDQPFFKRSNGWDHFITMGRITWDFRRSRDRDWGSSCIHKPGIRNVTRLLIERNPWDYFDVGVPYPTGFHPRSKSDVTHWQNFVRARHRNALFCFAGAPRRAFRDDFRGVLLSQCRDSGESCRTVNCTGTRCSNGTSAILETFLDSDFCLQPRGDSFTRRSIFDCMVAGSIPVFFWRRTAYVQYEWFLPREPGSYSVYIDHNAVRNGTVTVKNVLEKFTKEEVRQMREKVIEYIPRLIYANAKEGLEGMKDAFDVAIEGVFKRFEKQEQPQFHKWK 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01056 485 Pfam Exostosin family 84 422 IPR040911 -
Spst10g01056 485 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 87 468 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01056 Spst-Chr10 11290356 11291813 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01056 - - gsj:114403132 866.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01056 10 11290356 11291813 Spst10g01056 10 11290356 11291813 ECH