Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01040 ATGGCTTTCTCTTCTAAACTTGACAACTTCATCTTCTCTGCCCACAAACCCCAAAACTCTACTGCTCCACTTTCGAAAATCCAACCTTCCTCCTTCCTCCCATGTCCTTCTTCCTTGAAGCCTCAAAAGCTTCCCTTTAGAATCCGCTACGGTTCAACCATCAGAGCCACGTCATCATCCTCATCCCCTTCCACAACCGTTGCTGAACCTGAAGGCATTAAGATTAATTCGATTCCAACCAAACCCATTGAGGGACAAAAGACTGGTACTAGCGGGCTTCGGAAGAAGGTGAAAGTGTTTATGCAAGAAAATTACCTTGCAAATTGGATCCAGGCCCTGTTTAATTCATTGCCTCCGGAGGATTACAAGAATGGTTTGTTGGTGTTGGGAGGTGATGGTCGATACTTTAATCGGGAAGCTGCACAGATAATAATCAAAATTGCTGCTGGAAATGGTGTTGGAAAAATTCTGGTTGGAAAGGAAGGTATTTTGTCAACACCAGCTGTTTCTGCAGTAATACGAAAGCAAAAGGCAAATGGTGGATTTATTATGAGTGCAAGCCATAATCCTGGTGGGCCTGAATATGATTGGGGTATTAAGTTTAATTACAGCAGTGGACAACCTGCACCAGAATCCATCACTGACAAGATTTATGGAAACACCCTGTCGATCTCTGAGATAAAGATAGCTGACATTCCTGATGTTGACTTATCAAAAGTTGGGGTTACAAAGTTTGGAAGCTTCAGTGTGGAAGTAATAGACCCAGTCTCTGACTATCTGGAGCTACTGGAGGGTAAATGTCGCAATTTCAATTTCCATTTTGATGAAGATCTTGTCAACATTCTGTATGCTGAAAATGGACCTGATTTTGGAGCTGCCAGTGATGGGGATGGTGATAGAAATATGATTCTAGGAAGAAGTTTCTTTGTAACTCCTTCAGACTCTGTTGCAGTTATTGCAGCCAATGCAGAAGCCATTCCCTACTTCAAGAATGGTGTTAAGGGTCTTGCTCGATCAATGCCGACAAGTGGAGCTCTGGATCGTGTTCCCACTGGTTGGAAATTTTTTGGGAATCTTATGGATGCTGGGAAGTTGTCAGTTTGCGGGGAAGAGAGTTTTGGAACAGGTTCTGACCACATTCGTGAGAAAGACGGCATATGGGCTGTCTTAGCTTGGCTTTCTATTATTGCACATCGCAACAAAGACAAGAAGCCAGGGGAGAAATTGGTCTCCGTATCAGATGTCGTGAAGGAGCACTGGGCAACTTATGGAAGGAATTTCTTCTCTAGATATGACTACGAGGAATGTGAATCTGAAGGTGCCAATAAGATGATAGAATACCTACGAGATATTGCGTCTAAGAGTAAGGCTGGTGATAAGTATGGAAGCTATGTCCTCCAGTTTGCAGATGATTTTAAGTACACGGATCCTGTAGACGGAAGTGTGGTATCAAAACAAGGCGTTCGATTTGTTTTTACAGATGGTTCAAGGATAATATATCGTTTATCAGGAACTGGTTCTGCAGGGGCAACTGTTCGAGTATACATCGAACAGTTTGAACCAGATGTCTCTAAACATGATGTTGATGCTCAAATTGCCTTAAAACCATTGATAGATTTGGCAATATCCGTATCAAAGCTCAAAGACTTCACCGGGAGGGAGCAACCTACAGTGATCACATAA 1683 0.4278 MAFSSKLDNFIFSAHKPQNSTAPLSKIQPSSFLPCPSSLKPQKLPFRIRYGSTIRATSSSSSPSTTVAEPEGIKINSIPTKPIEGQKTGTSGLRKKVKVFMQENYLANWIQALFNSLPPEDYKNGLLVLGGDGRYFNREAAQIIIKIAAGNGVGKILVGKEGILSTPAVSAVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKIADIPDVDLSKVGVTKFGSFSVEVIDPVSDYLELLEGKCRNFNFHFDEDLVNILYAENGPDFGAASDGDGDRNMILGRSFFVTPSDSVAVIAANAEAIPYFKNGVKGLARSMPTSGALDRVPTGWKFFGNLMDAGKLSVCGEESFGTGSDHIREKDGIWAVLAWLSIIAHRNKDKKPGEKLVSVSDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRDIASKSKAGDKYGSYVLQFADDFKYTDPVDGSVVSKQGVRFVFTDGSRIIYRLSGTGSAGATVRVYIEQFEPDVSKHDVDAQIALKPLIDLAISVSKLKDFTGREQPTVIT 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01040 560 Gene3D - 259 308 - -
Spst10g01040 560 ProSitePatterns Phosphoglucomutase and phosphomannomutase phosphoserine signature. 181 190 IPR016066 GO:0000287
Spst10g01040 560 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 312 423 IPR005846 GO:0005975|GO:0016868
Spst10g01040 560 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 271 560 IPR045244 GO:0004614|GO:0005975
Spst10g01040 560 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 86 225 IPR005844 GO:0005975|GO:0016868
Spst10g01040 560 Pfam Phosphoglucomutase/phosphomannomutase, C-terminal domain 483 535 IPR005843 GO:0016868|GO:0071704
Spst10g01040 560 FunFam Phosphoglucomutase 5 74 262 - -
Spst10g01040 560 Gene3D - 74 258 - -
Spst10g01040 560 FunFam Phosphoglucomutase 5 406 560 - -
Spst10g01040 560 Gene3D - 309 395 - -
Spst10g01040 560 SUPERFAMILY Phosphoglucomutase, first 3 domains 75 267 IPR016055 GO:0005975|GO:0016868
Spst10g01040 560 Gene3D - 406 560 - -
Spst10g01040 560 SUPERFAMILY Phosphoglucomutase, first 3 domains 296 430 IPR016055 GO:0005975|GO:0016868
Spst10g01040 560 SUPERFAMILY Phosphoglucomutase, C-terminal domain 425 560 IPR036900 GO:0016868|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01040 Spst-Chr10 11133130 11142920 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01040 K01835 - gmx:100802730 993.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01040 10 11133130 11142920 Spst10g01040 10 11133130 11142920 ECH