Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01032 ATGACCGAGAGACCAACACCGACGAGGAAGAGAAAAATGGGAGACACAGAGGAGACAGCTCCTAAGAAACCTGCGGTAAAATGGCCTCTCATCAAACCCAAAAAGAATCTTCAGATTACCCGACTTCGAGATTTCGATCTCTTCACGGTCCAGAATTTTTTCTCCTCTGCTGAATCAAAGGCATTCGTTAAAAATGCTGAAGCAATTGGTTTTGTTCATCAAGGGAGTCTAGGTCCTACTTATGGTGAAGCTTACAGAGATAATGATCGAATCTCAGTGGATGATCCTGTACTTGCAGATACTATTTGGGAATCTGGACTTAGCAAACTATTCTCTGATATAAGAATTCGAGGAAAGGTTGCTGTAGGTCTGAATCCAAATATTAGATTCTATAGGTACAAGATTGGTCAACGGTTTGGACGGCATATTGATGAAAGTGTTAATCTTGGAGATGGAAAACGCACTTACTATACACTTCTGGTGTATTTGAGCGGTGGACTTGGTGAACTTAAGTCAAAGCCCAAAAATGATTCCAGCAATTCCTCAGTTTCATCTGTTGATCCTTTAGTTGGTGGAGAAACAGTATTTTATGGTCCAAGAAATAAGATTGTGGCTGAGGTGGCTCCAACGGAAGGGACAGCACTTCTGCACCTTCACGGAGATAAATGTTTGCTGCATGAAGCAAGAAATGTTACCAATGGTGTCAAGTATGTGTTTCGTTCAGACGTAGTATTTGCTTGA 741 0.4143 MTERPTPTRKRKMGDTEETAPKKPAVKWPLIKPKKNLQITRLRDFDLFTVQNFFSSAESKAFVKNAEAIGFVHQGSLGPTYGEAYRDNDRISVDDPVLADTIWESGLSKLFSDIRIRGKVAVGLNPNIRFYRYKIGQRFGRHIDESVNLGDGKRTYYTLLVYLSGGLGELKSKPKNDSSNSSVSSVDPLVGGETVFYGPRNKIVAEVAPTEGTALLHLHGDKCLLHEARNVTNGVKYVFRSDVVFA 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01032 246 SMART p4hc 45 244 IPR006620 GO:0005506|GO:0016705|GO:0031418
Spst10g01032 246 MobiDBLite consensus disorder prediction 1 22 - -
Spst10g01032 246 Gene3D q2cbj1_9rhob like domain 35 241 - -
Spst10g01032 246 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 123 246 IPR005123 -
Spst10g01032 246 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 44 240 IPR045054 -
Spst10g01032 246 FunFam 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 34 241 - -
Spst10g01032 246 MobiDBLite consensus disorder prediction 1 24 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01032 - - vun:114191541 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01032 10 11002765 11004166 Spst10g01032 10 11002765 11004166 ECH