Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01024 ATGAACAGAAGTCACGGGCTGTACATGCAGAGGTCACGGGCTGTACAACCAACTTCAAGTGTTCACAGCTTCACGTGTTCACAGCTGATAGAACTTGAACCAAAGCCCGTAGTTATAAAACTTATTCTTTCTTCTCTAGTTACAGTAAGCGTCTCCTTTCCTTTCAACCATGACTGCCTCGTCGTTCTAGCGCCAAACTCTCCTCCAGTTGCCACCTCTCCGGCCGCCATGGTGGGCCTCGTGGGTGCAGCTGCAGTCGTGTGCATGCATGAGAAGAGGTCCATAATCCCCCTCCACAATCAGCTATGCATGACGACAATAATCTCTGCGTGGCGCATGGTAGGAGCCAAAAAACAGCTCCACGACAACCTCTGCATGGCCATCTCAGGCGGCGATGTTGGATCTTCACCGGCGGCCATCAACTTCGGTGTGACCTTGTCCCACCAACAACTTGCTTGGTATCTTGTCGGAGGAACACCCCAGGTATGGTTCTGTGTCTTCTCTGTCATGGTTGGAACCTCAAACTTGGTTGGCTGTATCTTAGGGGCACCGTCAAGTTCGCCGTCAGCTTGTCCTACAAAGAGCTTCGTTCATATCTTCTCCCACATGTATGGTTCATATGTTGTTTTCCATGGTTGCAACCTGAAACCGGTTCTACTCGGTGTTGTACTCCATGCATGGTTGAGATACACATCAATGGGTTGGATGTTGGAGAAGTTTATATGGGCATTTCTTATTGAGTGCACATTCCTTGCTGGTCTATCTCATTCTCATCAAGCTTCAAAGTACTCCTTTGTAAGAGAAGCAACATCTGCTCCACCGATCCTGTCTTATGACTACATAATCATTGGTGGAGGATCATGTGGGTGTCCCCTTGCAGCAACTCTCTCACAAGGTGCAAGAGTTTTAGTCCTTGAAAGGGGAGGTTCTCCTTACACAAATCCTGAGCGAATCCACCTAAAGAACTTTGTCAACTCCCTGGCAGATATAACCCCTTCATCATTTTCCCAACCGTTCCTATCCACAGATGGGGTTCTTAATTCCAGGGCTCGTGTCCTTGGCGGTGGCTCTGTCTTGAATGCAGGGTTCTATTCAAGGGCTAGCTCCGAGTACGTAAGGACTTCGGGTTGGAATGAATCTTTGGTTGAGGATTCTTATAAATGGGTTGAAAAGAAATTGGTTTTTGAGCCCCCAATGCTGCAGTGGCAATCAGCAGTGAGGGATGGACTGCTGGAAGTAGGTGTGTTGCCTTACAATGGTTTTACTTATGATCACTTAAATGGGACTAAGATTGGAGGGATAATCTTTGATAAGGACGGTAACAGGCACACTGCAGCTGATTTGTTAGAGTATGCTGATCCCAAGAGAATTGCTGTATATCTCCATGCCACAGTGCCCAAGATACTATTTAAGCATAACATAGAAAAAAGAAGACCCGAAGCTTATGGAGTAATGTTCCTAGATGCAATGGGAGTTATGCATACAGCATACTTAAACAAAAATGCAAAGAATGAGATAATCTTAGCAGCTGGTGCAATTGGAAGCCCACAGTTGCTGATGCTGAGTGGAATTGGTCCTGCTAACCATCTGAAGGCTCATGGAATCAACGTGGTTTTGGATCAGCCATGGGTGGGTCAAGGGATGGCAGATAATCCAATGAATCTTCTGGTGGTTCCTTCCCTTTTGCCTGTTGAAGTCTCTCTGGTCCAAACAGTGGGCATCACAAAGTTTGGCAGCTTCATCGAATCAGGCAGTGGATTAAGATTAGGCTATTCTTGGTCTGAAAAGCTTCAAAGGATTTTTGAATTTGTGTCAAACCAGTCTGGTCAGCCTTCCACGCTTTCCTCAGAAAACAAGCAGAGTGCTGCAGAGTTCGTTAGATTTTTAAACAGTCCAACTCTCAAAGGAGGAATCATAATTGAAAAGATAACGGGACCAAGATCCACAGGTCATTTGGAGCTCAGGAGCAGAAATCCCTATGATAATCCATCAGTTACCTTTAACTATTTCAAGGATCCAGAAGACTTAAGAATCTGTGTTGAAGGGATGAAAACCATCATTAATGTGATAAACTCAAAAGCATTATCAAAGTTCCGCTACCCTAACCTACCAGTCCAAGCTCTAATAGACTTCATGTTGCTGATACCAATGAACTTGAGGCCAAAACATGCTAATGCTGCTTTTTCTTTAGAACAGTATTGCATAGACACTGTGCTAACAATTTGGCATTACCATGGAGGGTGCCACCTTGGTAAAGTTGTTGATCATAATTACAAGGTTATTGGGGTCGAAGCTCTGAGGGTCATTGATGGATCCACTTTTTATCGCTCACCGGGGACTAATCCTCAAGCCACTGTCATGATGCTTGGAAGGTATATGGGAGAAAAGATTATAAACAAAAGATCCTTCAGTGGCCAGAAAAGTGAAGGGATCAATTAA 2439 0.4498 MNRSHGLYMQRSRAVQPTSSVHSFTCSQLIELEPKPVVIKLILSSLVTVSVSFPFNHDCLVVLAPNSPPVATSPAAMVGLVGAAAVVCMHEKRSIIPLHNQLCMTTIISAWRMVGAKKQLHDNLCMAISGGDVGSSPAAINFGVTLSHQQLAWYLVGGTPQVWFCVFSVMVGTSNLVGCILGAPSSSPSACPTKSFVHIFSHMYGSYVVFHGCNLKPVLLGVVLHAWLRYTSMGWMLEKFIWAFLIECTFLAGLSHSHQASKYSFVREATSAPPILSYDYIIIGGGSCGCPLAATLSQGARVLVLERGGSPYTNPERIHLKNFVNSLADITPSSFSQPFLSTDGVLNSRARVLGGGSVLNAGFYSRASSEYVRTSGWNESLVEDSYKWVEKKLVFEPPMLQWQSAVRDGLLEVGVLPYNGFTYDHLNGTKIGGIIFDKDGNRHTAADLLEYADPKRIAVYLHATVPKILFKHNIEKRRPEAYGVMFLDAMGVMHTAYLNKNAKNEIILAAGAIGSPQLLMLSGIGPANHLKAHGINVVLDQPWVGQGMADNPMNLLVVPSLLPVEVSLVQTVGITKFGSFIESGSGLRLGYSWSEKLQRIFEFVSNQSGQPSTLSSENKQSAAEFVRFLNSPTLKGGIIIEKITGPRSTGHLELRSRNPYDNPSVTFNYFKDPEDLRICVEGMKTIINVINSKALSKFRYPNLPVQALIDFMLLIPMNLRPKHANAAFSLEQYCIDTVLTIWHYHGGCHLGKVVDHNYKVIGVEALRVIDGSTFYRSPGTNPQATVMMLGRYMGEKIINKRSFSGQKSEGIN 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01024 812 Gene3D - 278 790 IPR036188 -
Spst10g01024 812 Pfam GMC oxidoreductase 278 552 IPR000172 GO:0016614|GO:0050660
Spst10g01024 812 SUPERFAMILY FAD-linked reductases, C-terminal domain 549 747 - -
Spst10g01024 812 SUPERFAMILY FAD/NAD(P)-binding domain 276 801 IPR036188 -
Spst10g01024 812 PANTHER OSJNBA0019K04.7 PROTEIN 243 801 - -
Spst10g01024 812 Gene3D - 395 740 - -
Spst10g01024 812 ProSitePatterns GMC oxidoreductases signature 2. 511 525 IPR000172 GO:0016614|GO:0050660
Spst10g01024 812 Pfam GMC oxidoreductase 646 791 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01024 Spst-Chr10 10939214 10950052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01024 235 802 Miscellaneous Gene Families AT5G51950 59.445 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01024 - - vun:114192811 988.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01024 10 10939214 10950052 Spst10g01024 10 10939214 10950052 ECH