Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01023 ATGGGTTCCTCCGCTGCGGGAAAAAACGTAGGAGATTCGGCGGCGTCGTACTGTGCCGTGATGTTGTTGGGCATGATACTGTTGGGATCAGTAAGGGAAAGCGCGGTGGCGGGAGAAGGTGAGGCTATAAAAGGGAACAACCTCCGTCAACGACCGTGCGATGAAATTTACGTTGTGGGAGAAGGGGAGACCCTGCACACAATCAGCGACAAGTGCAATGACCCGTTTATCGTGGAACGGAACCCGCATATCCATGACCCGGATGATGTTTACCCTGGCCTTGTCATCAAAATCACTCCCACCCGTCAATACTAA 315 0.527 MGSSAAGKNVGDSAASYCAVMLLGMILLGSVRESAVAGEGEAIKGNNLRQRPCDEIYVVGEGETLHTISDKCNDPFIVERNPHIHDPDDVYPGLVIKITPTRQY 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01023 104 Gene3D LysM domain 48 103 IPR036779 -
Spst10g01023 104 CDD LysM 56 98 IPR018392 -
Spst10g01023 104 PANTHER EMBRYO SAC 1 10 102 - -
Spst10g01023 104 Pfam LysM domain 57 99 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01023 Spst-Chr10 10910140 10910454 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01023 - - pvu:PHAVU_007G066300g 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01023 10 10910140 10910454 Spst10g01023 10 10910140 10910454 ECH