Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01007 ATGGCAAGGAGAGATCTTGAGAGTGGCGGTGGAGGAACCAAGAACAACAGAATCGAAGAAAACTACTCTGCTCATGAATCTTCTCATGTTTATGAAGCTGAGAGCCATTGGACATCATGGCTCGTTCCTATGTTTGTGGTCGCTAATATTGCTGTTTTTGTTATTACCATGTACATCAACAATTGTCCCAAGAACAATCTCGGCCTCCAAGGTGGCTGCGTGGCCAAGTTCCTTGGAAGGTTCTCCTTCCAACCTATGCAGGAGAATCCGTTGCTTGGCCCTTCTTCTTCAACGTTGGCTAAGATGGGAGCCCTTCGGTGGGATAATGTTGTGAACGGGCATCAAGGATGGAGACTTATCACTTGCATTTGGTTACATGCTGGGATTATTCATTTGCTTGCTAACATGTTGAGTCTGGTTTTCATTGGCATTCGTCTGGAACAACAATTCGGGTTTGTAAAAATTGGAATTATATACCTGGTGTCTGGGTTTGGTGGAAGTGTATTGTCATCTCTGTTTATCATAGACCATATCTCAGTTGGTGCTTCTGGCGCCCTTTTTGGACTTCTTGGCGCAATGCTGTCTGAACTTCTCACAAACTGGAGTATATATTCCAACAAGGCAATGGCATTACTCACCCTGCTAGTGATCATTGTGATCAACCTTGGCATTGGCATTTTGCCACACGTAGATAACTTTGCTCACATTGGAGGATTCCTGGTGGGATTTCTCCTTGGTTTTATTTTGTTGCCTCGTCCTCAGTTTGGATGGTTAGAGCAGCGTCGTCTTCCCGCCAATGTGCGTTTGAAGTCAAAGTACAAGGCCTACCAATATGTTCTATGGATTGTGTCTCTAGTTCTGTTGATTACAGGATTAACAATCGCATTGGTGATGCTATTCCGGGGTGAGAAAGGGTATGATCACTGCCATTGGTGTCGCTACCTTACATGTGTTCCGACTTCTAAATGGGAATGCAGCAATGGCAGCTAA 990 0.4465 MARRDLESGGGGTKNNRIEENYSAHESSHVYEAESHWTSWLVPMFVVANIAVFVITMYINNCPKNNLGLQGGCVAKFLGRFSFQPMQENPLLGPSSSTLAKMGALRWDNVVNGHQGWRLITCIWLHAGIIHLLANMLSLVFIGIRLEQQFGFVKIGIIYLVSGFGGSVLSSLFIIDHISVGASGALFGLLGAMLSELLTNWSIYSNKAMALLTLLVIIVINLGIGILPHVDNFAHIGGFLVGFLLGFILLPRPQFGWLEQRRLPANVRLKSKYKAYQYVLWIVSLVLLITGLTIALVMLFRGEKGYDHCHWCRYLTCVPTSKWECSNGS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01007 329 FunFam RHOMBOID-like protein 35 252 - -
Spst10g01007 329 Gene3D - 35 252 IPR035952 -
Spst10g01007 329 PANTHER RHOMBOID-RELATED 14 325 IPR002610 GO:0004252|GO:0006508|GO:0016020
Spst10g01007 329 SUPERFAMILY Rhomboid-like 36 254 IPR035952 -
Spst10g01007 329 Pfam Rhomboid family 112 253 IPR022764 GO:0004252|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01007 Spst-Chr10 10722027 10724729 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01007 - - gmx:100784224 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01007 10 10722027 10724729 Spst10g01007 10 10722027 10724729 ECH