Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01000 ATGCTGGAGTTGGTGTTGTTGAACAAGAACCCATTGCTCCACGCATCACTCTCTCTAATCCTCGCCTTCACCTTCGTTTTCTTCAAAATTCCTCTCCTCTTCCTTCACGCTCTCCAGACCTACATCCAACCCGATTCCCAGCCCCAATCCAATGGCCTCAGAGCCGCCATCCGCCGCCCCGGCATCGACGGCTACCAGCCCCTCTCCGCCAAAACCTCCGCCGAACTCAAGAAGAGGAACAAGTCCAACAAGGACAAGCCCGATTTCGACGAAAACAATGCTCAGATCTTCAGACTCACGCTCGACCACACCTACCTCCAGTCCCGTCTCTTCGCCGATCAGTATTGCGTCGCTTTCACTCTCTCATTCGCTGCCCTATTCTCCCTCTTGCTCCACAATTTTCTCCAATCGCCCCCGGACAGTGGGTTCTTCGCCAACGGCGTTTTCGTTCCCATTCTGTTATCAATTTTGAGTCTTTACATGTGGGGGACGCTCCTCGGTAAGGTCACGTTCGAGAGATCCGCGTCTAGGAGGTCTGAGAAGCAACTGAGTGTCGTTTTGGGGGTTTTGGGGCTTTTTTTGGGGCTTTTGTTTGTTCCTGAGGGCGTGTCTTCGGTTTTGGAGTTCAAATTCGAGGTTCCAATTGATGGGTTTTGGAGGTTTCTCGTTGCTGCATTGATGGGTTTCCTTGCCGGGTGTTTGCTCATTCCTGCTTCTAGAAGTGCACGTTGTTTTTGGCTTGGGACTGATCAGATACGATGCAATTTGTCGATGATAACTTGTGGGTGGTTTACTCGTGCGATCCTTTATGCAAATCAGGTGTTCGTTATATTTGTAGCTCTGTTGTGGATAACCCCCTTGGCTGAGATTTTTATAAATAGTGGAGATGGTGTGGCAAAGAGTGGAATTGGTAATGCGGAGAAATTGGTGGGGAATGTGGGGTTCTTGCCTTCTGATTTTGGTAGCTTCAGGAAGTGGTGCTTGTTGGGGTCTAGTTTATTGCAGATTGTGGCTTTGAGGCCTAACCTACAGATGTATCTGAATGAAGCTTTGTTGTCTTGGTACCAAAGGCTTCATGCTAGCAAGGTTCCTGACTTGGATTATAGTAGGGCAAAGATGTTTCTGCATAATCACTACTTGTGCCTTGTGGTTTTGCAGTTCCTTGCACCTCCTGTGCTGGTTCTTGTCTTTCTTGGTTTGTCTCAGATTGATGGTGTTTCCTTTGGAAATTTTACCATGTCGAGTGATTTACTGTCCAGATTTGCTTTCTTCAAAGAAGTGGCTTTGTTTTTGGCTTGGTGGGTAACCTTCCTCTGGGCACTGTTCTCCTCGGTGATCCTTATGCTACATCGCCACTGTGTTTTATATGTTTCTTAA 1377 0.4786 MLELVLLNKNPLLHASLSLILAFTFVFFKIPLLFLHALQTYIQPDSQPQSNGLRAAIRRPGIDGYQPLSAKTSAELKKRNKSNKDKPDFDENNAQIFRLTLDHTYLQSRLFADQYCVAFTLSFAALFSLLLHNFLQSPPDSGFFANGVFVPILLSILSLYMWGTLLGKVTFERSASRRSEKQLSVVLGVLGLFLGLLFVPEGVSSVLEFKFEVPIDGFWRFLVAALMGFLAGCLLIPASRSARCFWLGTDQIRCNLSMITCGWFTRAILYANQVFVIFVALLWITPLAEIFINSGDGVAKSGIGNAEKLVGNVGFLPSDFGSFRKWCLLGSSLLQIVALRPNLQMYLNEALLSWYQRLHASKVPDLDYSRAKMFLHNHYLCLVVLQFLAPPVLVLVFLGLSQIDGVSFGNFTMSSDLLSRFAFFKEVALFLAWWVTFLWALFSSVILMLHRHCVLYVS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01000 458 Pfam Predicted transmembrane protein 161AB 219 397 IPR019395 -
Spst10g01000 458 PANTHER RE42071P 12 455 IPR019395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01000 Spst-Chr10 10651284 10652660 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01000 - - gmx:100793355 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01000 10 10651284 10652660 Spst10g01000 10 10651284 10652660 ECH