Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00983 ATGGATTCAAGAGTAGTTCAAAATGAAGTGCATGAGAATGATGAACACTACTCCTACATTGTTCCCTCAGAGCAAGTGACACATGGTGAAGAAGAGCAGCACTTTGATCATGAGAAGAAGTCTGTTTTGAATAAAGTCAAGGCAAAGGCTATGAAAATCAAGGACAGTATTAAGAAGCATGGCCATCAAGTCCTTGATGGTAGCCGTGAGTATAACAATGAAGATCAGCACCATCTTGATGATCATGACATAGATGAGGATAAAGACATGGATGAAGACACACAAGTTCATGAAACACCAATTCATGAAAATGAAGATGTTAAAACTGCTACACCCACATGTGAGCAAGTCGAAACTTTAGGGAAGTCAGGAATTGATTTTGGAAGTACAACAGTTATGGCAGATGAAGCTCATCACGATTCACTACCTTCAACCACTGACATTGATCAAAACATAGCCACTGAGCCAGCCAACACATTTTCTGCAGAAAAGAAAAGAGGACTTCCAAAGGACAATTTGGATTGGTCAATAGGCTTGGAGGAAGAACCTTACTCTCCCAGAAATAGGCCTGAGGCATATACTCCTCCCAAATATCAAACCAAAGTCACGGATCCAACTGAAGTAGTAAAAGAAGAAACGGAAATCACACCAGTCGAGGAATCTTTTGCGAGAATGAATGTGCAGGATGAGCCAAAATCTACTCCAGAGCTAAACGTCCAGCCAACTATTGCTGATTCTGAATACCCTCATGTTGGAAACCATGATCATTTAGTGCCACACCTTTCTGCTGAAATGAAAACTCAGTATCCTTCCTCTGAATGTCATAAGCAGTTCACTCAGGGAACGATATCCCCAAGTATTAACAGTAACATGGAAAATGTCACAGACAGTGGACAAACTTTCAACACCATGACAATCACAGCTGAAGAACACTCTTGCTATGAAGAAAACACTGATAAAGTTGTCTCTCCTAAAGATGTAATAGCTTCTGGGGTAGGTTCAGATGAGAAAGATGACATAAAGGACAAGGTGGTAACAAATGAAGAGCAGCAAAAAAGTGGGGATGTTTCTAACATGTTTGGCTCAACTGCCCTATATGGGAAGAACATTGCTCACTCTCTGACAGAGAAATTAGCTCCAGTTTATGAGAAGGTTGCAGGGGTAGGAAGTGCAGTGAAGTCCAAAGTGTCTGGAACTAGCACCGGTGGTGTTGAAACTGAGACAAAAAATGAGGTTAAAGAACAAGACACAGGGGTTTCTGTGAAGGACTATTTGGCTGAGAAGCTAAGGCCTGGTGAAGAGGACAAGGCACTTTCTGAGGTAATTTCTGAAGCTTTATATAAGAGGAAGGAAGAACCAGTGAAAAATGAGCATCACTTGGATGATGAGGATGAGAAAATATGTGAAGAGAGTTGTGTGCATTCAGGAAAAGGTGTGGTTGAAAAGCTTAAGGGTGTTGTTGGTTCATGGTTTGGCAAATCTGAGGGAAAAGGAGGTGAAGATTTATCCAAGAACACAAATTCTGGTGCAGAATTGGAACAGGTTAACCAAGTTGTTGATGAAAACAAGAGTAGTCCAATTGAAGAACAAGGGACTAGCTAA 1602 0.4107 MDSRVVQNEVHENDEHYSYIVPSEQVTHGEEEQHFDHEKKSVLNKVKAKAMKIKDSIKKHGHQVLDGSREYNNEDQHHLDDHDIDEDKDMDEDTQVHETPIHENEDVKTATPTCEQVETLGKSGIDFGSTTVMADEAHHDSLPSTTDIDQNIATEPANTFSAEKKRGLPKDNLDWSIGLEEEPYSPRNRPEAYTPPKYQTKVTDPTEVVKEETEITPVEESFARMNVQDEPKSTPELNVQPTIADSEYPHVGNHDHLVPHLSAEMKTQYPSSECHKQFTQGTISPSINSNMENVTDSGQTFNTMTITAEEHSCYEENTDKVVSPKDVIASGVGSDEKDDIKDKVVTNEEQQKSGDVSNMFGSTALYGKNIAHSLTEKLAPVYEKVAGVGSAVKSKVSGTSTGGVETETKNEVKEQDTGVSVKDYLAEKLRPGEEDKALSEVISEALYKRKEEPVKNEHHLDDEDEKICEESCVHSGKGVVEKLKGVVGSWFGKSEGKGGEDLSKNTNSGAELEQVNQVVDENKSSPIEEQGTS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00983 533 MobiDBLite consensus disorder prediction 158 215 - -
Spst10g00983 533 MobiDBLite consensus disorder prediction 58 91 - -
Spst10g00983 533 MobiDBLite consensus disorder prediction 58 84 - -
Spst10g00983 533 MobiDBLite consensus disorder prediction 394 415 - -
Spst10g00983 533 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 1 517 IPR037491 GO:0009737
Spst10g00983 533 MobiDBLite consensus disorder prediction 491 533 - -
Spst10g00983 533 MobiDBLite consensus disorder prediction 501 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00983 Spst-Chr10 10538800 10541637 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00983 - - var:108325293 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00983 10 10538800 10541637 Spst10g00983 10 10538800 10541637 ECH