Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00971 ATGGCCAACGCAGCATCTGGAATGGCTGTTCTTGACGAGTGTAAATTAAAATTCCTGGAGCTCAAGGCAAAGAGGAACTACCGTTTCATTGTGTTTAAGATTGAGAACAACGAAGTTGTAGTGGAGAAACTTGGAAGCCCAGAAGAAACCTACGAGAACTTCACTGCATCTCTGCCTGCCAATGAGTGCCGCTACGCTGTCTTTGATTTTGATTTCACAACAAATGAAAACTGCCAGAAAAGCAAGATTTTCTTCATTGCATGGGCTCCCGATACATCCAAGGTTAGAGAGAAGATGGTGTATGCCAGCTCCAAGGACAGATTCAAGAGGGAACTTGATGGCATTCAGGTTGAGTTGCAAGCAACGGATCCAAGTGAGATGAGCTTTGATATCATAAAAGCACGGGCTATATAA 414 0.4372 MANAASGMAVLDECKLKFLELKAKRNYRFIVFKIENNEVVVEKLGSPEETYENFTASLPANECRYAVFDFDFTTNENCQKSKIFFIAWAPDTSKVREKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAI 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00971 137 FunFam Actin-depolymerizing factor 2 1 137 - -
Spst10g00971 137 SMART adf_2 12 137 IPR002108 GO:0003779
Spst10g00971 137 SUPERFAMILY Actin depolymerizing proteins 3 135 - -
Spst10g00971 137 CDD ADF_cofilin_like 6 136 IPR017904 GO:0015629|GO:0030042
Spst10g00971 137 Pfam Cofilin/tropomyosin-type actin-binding protein 14 134 IPR002108 GO:0003779
Spst10g00971 137 PANTHER COFILIN-RELATED 2 136 IPR017904 GO:0015629|GO:0030042
Spst10g00971 137 Gene3D Severin 1 137 IPR029006 -
Spst10g00971 137 ProSiteProfiles ADF-H domain profile. 5 137 IPR002108 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00971 Spst-Chr10 10422550 10424125 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00971 K05765 - ahf:112779196 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00971 10 10422550 10424125 Spst10g00971 10 10422550 10424125 ECH