Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00939 ATGACACGATCCTTGGCAATGGCTTCTTCATCAATGTTGTGTCCAAAGCTGGGGAATTGGGCAGTGTCACATGCAAAGTTCCAAGTTTTTCAAATCTCTTCAAAGTTCTCTCCACTGGGTCGAGGCCTTTTCTCACCTTGGAATGGTTTAAAGCATCTGGGTATCTCAGCTAAACCGAAACCCCTTCTTCACATAGCTACAAAGGGAGGGTGTAAGGGTAAGGTGGTTTACGCTTCTCTCTTCGGGGTTGGAGCTCCTGAAGCTTTGGTAATTGGGGTCGTTGCTTTGTTGGTTTTTGGTCCTAAAGGTCTTGCTGAGGTTGCTCGAAATCTGGGAAAAACATTGCGGGCATTTCAACCCACCATTAGGGAGCTTCAGGATGTTTCAAGGGAATTTAAGAGTACACTTGAACGGGAGATTGGTCTTGATGACAATTTAAGTCCAACCCAGAACACATACAACTCCAATGTAAGCAATACAAGATCAACATCATCATCCACTGTTGACCCTAATGGAACACCAGATTCTACAAAAGTATACAGCTCAGAGGAATATCTTAAGATTACAGAAGAGCAGCTGAATGCATATGCTACACAACAGCAGGGGCAAACACCTCCCAAGGAAGGTGAGGATGAGCCTCAAATCCAGCCTCCTGCTGAAGAAACAGCCGCTGCTGTGCCTCCACCGAAGAAGCCCGAAAGTGAGACGTTACCTCTGGATTCATAG 726 0.4587 MTRSLAMASSSMLCPKLGNWAVSHAKFQVFQISSKFSPLGRGLFSPWNGLKHLGISAKPKPLLHIATKGGCKGKVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKSTLEREIGLDDNLSPTQNTYNSNVSNTRSTSSSTVDPNGTPDSTKVYSSEEYLKITEEQLNAYATQQQGQTPPKEGEDEPQIQPPAEETAAAVPPPKKPESETLPLDS 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00939 241 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC 21 235 - -
Spst10g00939 241 MobiDBLite consensus disorder prediction 144 179 - -
Spst10g00939 241 MobiDBLite consensus disorder prediction 139 179 - -
Spst10g00939 241 PRINTS Bacterial sec-independent translocation TatB protein signature 100 119 - -
Spst10g00939 241 PRINTS Bacterial sec-independent translocation TatB protein signature 80 100 - -
Spst10g00939 241 FunFam Sec-independent protein translocase protein TATB, chloroplastic 80 129 - -
Spst10g00939 241 Gene3D - 80 138 - -
Spst10g00939 241 MobiDBLite consensus disorder prediction 193 207 - -
Spst10g00939 241 Pfam mttA/Hcf106 family 83 133 IPR003369 GO:0015031
Spst10g00939 241 NCBIfam twin-arginine translocase TatA/TatE family subunit 82 127 IPR006312 GO:0016020|GO:0043953
Spst10g00939 241 MobiDBLite consensus disorder prediction 193 241 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00939 - - gmx:100799045 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00939 10 10133313 10137688 Spst10g00939 10 10133313 10137688 ECH