Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00936 ATGTTGGATTTGATGTTTGAATTGATAATCACCGACATGTCGCTCAAAAGCACGAGACGAGAAGAAGTTCATCTTTGCGAAGACGAAGAAGGAACTATGAATACCGCAATAAAGTCACAACCTTTTAAAAGATCGGTTGGCTTAACCCATGAGAACTACCACTTCACCTTCCCATTTTCTTTCCATGGAATATTGGACCCAAGGCTGCCACGTGGCAAGGGTCGATTCATCTGCCACCTGTATAGTCTTCTTGCTCATCTGATATTACACATTAAATATTCCCAAACAAATGGTCCCATAGTTTTGGGTGCCCCTTACCCCAAAAGAAATTGTGTGGGGTACATACATGAACGTGAAACATTAGAGATTTCACAGAAATTTCTTCCAAAATTATTTGGTCAAGAAAATGATGTAGCTGAACTCGGTGGCCATTATTCACTTCTGTCCATTCCCAACATGTTTTCCTCTGCCATCACTTTGCCCACCGAAGAGGTTCCTTCAGGTCCAAACATACACTTCAGCAAGCTAGATCCAACTAAGTACGAGACCATTAAGTCAACTGCGTGTAATTTTGAAGATCATGATTATTGTACTCTATCCTTGTCAACTATTGAAAATCATGAATATTGTGTACGCTTCTCGTTCTGTGCGGAGTTTGACGTTGGATCGGAGGTGTACACGGTGATTGCGATGGAAACTCCCCTGCTGGTGAATAGCGAAGGGGGCGCGCAGGTAGCCGAGGACGGTGACTACGCGCCGGTGAAGGATTTCAAAGATGTTAAGAACGTGTTCTGGACCGAGACAAAGAAGACGTGGCTGATTGCGTTGCCTATCGCTTTCAACATATGTTGCCAATTCGGTGTGAACTCTGTCACGAGCATCTTCGTCGGACACCTCGGCGACATTGAGCTCTCTGCTGTCTCTCTCATCAATTCCGTCATTGGCACTTTCGCCTTTGGTTTCATGCTTGGGATGGGAAGTGCAACTGAGACGCTATGTGGACAAGCTTTCGGAGCTGGGCAGATTCATATGCTTGGTGTTTATATGCAACGCTCATGGGTGATTTTATCAGGGACCAGTATTTTGCTCTTGCCAATATACATTTTTGCTGGTCCAATTTTGAAGCTTCTTGGTCAACAGAAAGATATAGCTGATCTTGCTGGGGATTTCAGTATTTTAGTAATCCCGCAATTTCTTTCACTTGCCTTTAATTTTCCAACGCAAAAGTTCCTTCAAGCTCAGAGTAAGGTTAACGTCATTGCATGGATTGGGTTTGTGGCTTTAGTTCTGCACGTTGGGTTGCTCTGGCTCTTAATTTATGCGTTAGATTTAGGCTTAACTGGTGCAGCTTTGGCATTTGATATCACGAGTTGGGGAATTACAGCGGCTCAACTTGTTTATGTTGTGATCTGGTGTAAGGATGGATGGAATGGATTGACATGGATGGCTATTAAGGATATTTGGGCCTTTGTTAGGCTTTCTCTTGCATCAGCTGTAATGCTTTGCCTTGAAGTTTGGTACATGATGAGTGTCATAGTTCTTGCTGGCCACCTCAACAATGCAGTGATTGCTGTTGATTCCCTCTCTATATGCATGAATATCAATGGGTGGGAAGGCATGATCTTCATTGGAGTAAATGCAGCTGTCAGTGTCAGAGTTTCCAATGAACTTGGGCTCGGACGTCCAAGAGCTGTCAAGTACTCTGTCTACGTGACAGTCTTTCAGTCACTTCTCTTGGGACTCTTTTTTATGGCTATTATTTTCGCGACAAAAGATTACTATGCCGTCATTTTTACTAACAGTAAGGTTTTGCAAGAGGCTGTTTCGGAACTAGGATTCCTCCTCGCTATTACAATGGTTCTAAATAGTGTTCAACCAGTGATTTCAGGTGTTGCTATTGGAGGTGGGTGGCAGGCCCTGGTGGCCTATATCAACGTAGGTTGTTACTACTTATTTGGGCTTCCACTGGGGTTCGTTCTTGGTTATACAGCAGATTTGGGGGTTGAGGGACTTTGGGGTGGTATGATGTGTGGAATTCTTCTCCAGACCTTGCTGCTCATGTTGATACTTTACAAAACCAATTGGAAGAAAGAGGTGGAGCAAACAAATGCTCGCATGCGGTTATGGGGAGGTCAAGATCTTCAGGTTGAAAAAACTACTGGCTTTGCTTAA 2172 0.4378 MLDLMFELIITDMSLKSTRREEVHLCEDEEGTMNTAIKSQPFKRSVGLTHENYHFTFPFSFHGILDPRLPRGKGRFICHLYSLLAHLILHIKYSQTNGPIVLGAPYPKRNCVGYIHERETLEISQKFLPKLFGQENDVAELGGHYSLLSIPNMFSSAITLPTEEVPSGPNIHFSKLDPTKYETIKSTACNFEDHDYCTLSLSTIENHEYCVRFSFCAEFDVGSEVYTVIAMETPLLVNSEGGAQVAEDGDYAPVKDFKDVKNVFWTETKKTWLIALPIAFNICCQFGVNSVTSIFVGHLGDIELSAVSLINSVIGTFAFGFMLGMGSATETLCGQAFGAGQIHMLGVYMQRSWVILSGTSILLLPIYIFAGPILKLLGQQKDIADLAGDFSILVIPQFLSLAFNFPTQKFLQAQSKVNVIAWIGFVALVLHVGLLWLLIYALDLGLTGAALAFDITSWGITAAQLVYVVIWCKDGWNGLTWMAIKDIWAFVRLSLASAVMLCLEVWYMMSVIVLAGHLNNAVIAVDSLSICMNINGWEGMIFIGVNAAVSVRVSNELGLGRPRAVKYSVYVTVFQSLLLGLFFMAIIFATKDYYAVIFTNSKVLQEAVSELGFLLAITMVLNSVQPVISGVAIGGGWQALVAYINVGCYYLFGLPLGFVLGYTADLGVEGLWGGMMCGILLQTLLLMLILYKTNWKKEVEQTNARMRLWGGQDLQVEKTTGFA 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00936 723 PANTHER MULTIDRUG RESISTANCE PROTEIN 260 695 - -
Spst10g00936 723 Pfam MatE 277 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst10g00936 723 Pfam MatE 497 659 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst10g00936 723 NCBIfam MATE family efflux transporter 277 672 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst10g00936 723 CDD MATE_eukaryotic 267 701 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00936 Spst-Chr10 10097675 10116407 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00936 K03327 - gmx:100799559 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00936 10 10097675 10116407 Spst10g00936 10 10097675 10116407 ECH