Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00933 ATGAATTCAGAGTCAGAGATGAGAAGAGGTGTTTCTGGGAAGATGTGTTTGCAAATGGGGATATGGTGGTTCTCCATGTTCATCTTTGTTGGGTATGTAATGGTTTGGATTGTGAAGCCCACCAACATGTTCTATCTACATTGGTTTCCAGACATTGAAGCAAAGGCAGATTCAATATACTTGGGAGAACAAGGGACAACCATACTCATATTCACATTTCCAATTTTATTAATTGCCACTTTGGCGGGTCTATACCTTCATTTGGAGCAAAAAAGTTCTTATGACAGTACTGAAAGCAAGGAGAGATTATTAGGATTGGCTTCATGGAAAAGACCATTGCTTACAAAAGGTCCTCTTGGGATAGTCACTATAACAGAGCTCTCTTTTGCTGTCATGTTCGTTTTACTCTTGATTTGGTCCTTCTGCTCCTACTTACATAGCATGTTTGCAAACGTGGCACAAGATGCAGCCAAGGAGAGAGACCATGTGTGGGAAGTCAAGCTGGATTATTCAGCCCTTGCTTTAGGCCTTGTTGGGAATATTTGCTTGGCTTTATTGTTCTTTCCTGTCTCAAGAGGGTCTTCAATTTTGAGGTTCATTGGCCTAACTTCAGAGGGAAGCATCAAGTATCACATATGGCTAGGACACACTGCAATGGTCCTCTTCACAGCCCATGGTCTAGGTTATATTATTTTTTGGTCCAAGACACATCAAACCTCAGAGATATTCAAATGGAACAAAGTTGGAGTCTCAAATGTGGCTGGAGAAGTTTCTCTACTTGCTGGATTAATCATGTGGGCTGCTACCTTACCTTCCATAAGGAGAAAAGCTTTTGAGCTCTTCTTCTACACTCATTACCTCTACATTGTCTTTGTAGTCTTCTATGTGCTACATTTGGGATTTTCCTCCTCTTGCACAGTGCTTCCAGGATTTTACCTATTTATGATCGACCGGTACTTGAGATTCCTACAGTCTCAGCAGAAAATTCGGTTGGTTTCTGCCCGAGTTTTGCCTTGTGAAGCTGTTGAATTAAATTTCTCCAAGAACCTAGGACTGTGCTATGCCCCTACAAGCACCATTTTCATTAATGTTCCTAGTATTTCCAAGTTGCAGTGGCACCCTTTTACAATTACCTCCTGCAGTGATACTGATCCTGACACCTTAAGCGTTGTCATAAAAAGTTCAGGAACCTGGTCCAATACTTTGTACCAGAAACTCTCTTCTTCATCTCCATTATCCCATCTTGATGTCTCCATTGAAGGGCCCTATGGACAAGATTCAACCTATTACTCAAGGCATGAATTGCTTGTGTTGATAAGCGGAGGAAGTGGCATTACTCCTTTCATTTCCATAATTCGTTCACTGGTCTTTAAGGCCAGCACTGAAGGTGGCAAAACTCCTAGAGTTCTTCTTGTATGTGCCTTCAAGAAGTCTATTGATCTCACCATGATAGACCTCATCCTCCCAGTTTCCACCACCAGCACCACCTTCGATATCTCACGCCTGCAGCTCCAGATTGAAGCCTACGTAACCAGAGATCAACAACCAGACATGGAAGACCAAAAGCTTACTCAAACATCATGGTTCAAGTCAAATCCATTAGATGAACCAGTGTCTGCAGTTTTAGGAAAAAACAGTTGGCTCTATCTTAGCATTATCATCTCATCCTCCTTTATAGTATTCCTTCTACTTATTGGAATCCTAACTAGATATTACATATATCCAATTGACCATAACACGGACCTGATATACCCTAATATCTCAAGATCTAGTCTAAGCATGTTGTTCATATGCATATCTATAGCCATTGTAGCAACATCTGCTTTCCTATGGAACAAGAAACAGAACACGGATTTGGAACAGATTAAAAACATTTACTCATCAAACCAATCAACTTCTCCGGGTTCAGGACACTACAATGATGAAAAAGAATTAGGGAGTCTTCCCCTCCAATCCCTTGTCCAAACAGCCAAAGTACATTATGGAGAAAGACCTGACATAAAAAAAATACTCTCTGGCTGTGATGGATCAAGCATTGGAGTTCTTGTTAGTGGTCCAAGAAAAATGAGACATGAAGTAGCATCAATTTGCACTTCTTGTTCCACAGATGACCTACATTTTGAGTCCATTAGCTTCAGCTGGTGA 2145 0.4103 MNSESEMRRGVSGKMCLQMGIWWFSMFIFVGYVMVWIVKPTNMFYLHWFPDIEAKADSIYLGEQGTTILIFTFPILLIATLAGLYLHLEQKSSYDSTESKERLLGLASWKRPLLTKGPLGIVTITELSFAVMFVLLLIWSFCSYLHSMFANVAQDAAKERDHVWEVKLDYSALALGLVGNICLALLFFPVSRGSSILRFIGLTSEGSIKYHIWLGHTAMVLFTAHGLGYIIFWSKTHQTSEIFKWNKVGVSNVAGEVSLLAGLIMWAATLPSIRRKAFELFFYTHYLYIVFVVFYVLHLGFSSSCTVLPGFYLFMIDRYLRFLQSQQKIRLVSARVLPCEAVELNFSKNLGLCYAPTSTIFINVPSISKLQWHPFTITSCSDTDPDTLSVVIKSSGTWSNTLYQKLSSSSPLSHLDVSIEGPYGQDSTYYSRHELLVLISGGSGITPFISIIRSLVFKASTEGGKTPRVLLVCAFKKSIDLTMIDLILPVSTTSTTFDISRLQLQIEAYVTRDQQPDMEDQKLTQTSWFKSNPLDEPVSAVLGKNSWLYLSIIISSSFIVFLLLIGILTRYYIYPIDHNTDLIYPNISRSSLSMLFICISIAIVATSAFLWNKKQNTDLEQIKNIYSSNQSTSPGSGHYNDEKELGSLPLQSLVQTAKVHYGERPDIKKILSGCDGSSIGVLVSGPRKMRHEVASICTSCSTDDLHFESISFSW 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00933 714 PANTHER NADPH OXIDASE 43 712 - -
Spst10g00933 714 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 436 709 IPR039261 -
Spst10g00933 714 SFLD Ferric reductase subgroup (FRE) 19 714 - -
Spst10g00933 714 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 324 429 IPR017927 GO:0016491
Spst10g00933 714 SUPERFAMILY Riboflavin synthase domain-like 328 425 IPR017938 -
Spst10g00933 714 SFLD Ferric Reductase Domain 59 714 - -
Spst10g00933 714 FunFam Ferric reduction oxidase 3 422 541 - -
Spst10g00933 714 Gene3D - 588 714 IPR039261 -
Spst10g00933 714 Pfam FAD-binding domain 328 426 IPR013112 GO:0016491
Spst10g00933 714 Pfam Ferric reductase NAD binding domain 433 697 IPR013121 GO:0016491
Spst10g00933 714 Gene3D - 417 544 IPR039261 -
Spst10g00933 714 CDD NOX_Duox_like_FAD_NADP 331 512 - -
Spst10g00933 714 Pfam Ferric reductase like transmembrane component 175 295 IPR013130 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00933 Spst-Chr10 10080298 10083992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00933 26 714 Miscellaneous Gene Families AT1G01580 50.935 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00933 K00521 - gmx:100779692 1189.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00933 10 10080298 10083992 Spst10g00933 10 10080298 10083992 ECH