Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00903 ATGTCCAATTCAAATATTCATTGCAACAAGAAGGACATGAACACACTCCTAAGCTTCAAACAAGGGCTCACAGATCCTTCTCACGTTCTCTCTTCATGGGTCCCAAACTTAGATTGTTGTCAATGGAGTGGAGTCAAATGTGATAATATCACAGGTAGAGTTACAAATCTTGATCTCCCTTGTCACACAAGCCACCCTAAAGTTGTTGAATTTGGTGAGAAGGACGACAAATTACACTGCCTATCAGGTTCATTCAGCTTGTCTTTGTTAGAACTTGAATATCTGAGTTACTTGAATTTGAGCAACAACAACTTCAAGTCCATGCAATATAATTCAATAGGTAGTCAGAAATGCGATGACTTGCCAATAGGTAACCTTTCTCATCTGTGTGGAAACTCCTCCAACCTCCGATATCTAGATTTATCACAAAATTATGATCTTCTTGTCGATAATCTCCATTGGATTTCCCATCTTACCTCATTGCAATATCTTAACCTTGGTGGTGTTTATCTTCACATGGACATTGATTGGCTTCAATCAGTGACCATGCTCCCTTCACTTTCAGAGTTACACTTGAAGAGGTGTAAACTTGAAAACATCTACCCATTTCTTCAACATGCCAATTTTACCTCACTTCAAGTTCTAAACCTTGCAGACAACGATTTCATATCTGAGTTGCCTGGTTGGTTATTCAACCTTAGTGACATCTCTCATATTGATCTTAGTCAAACTTGCTTACACAGCCAACTACCAGACGCATTGCCAAACCTGAGAAGTATTAAATCCTTGATTTTATCTCATAACTATCTCAGAGGACCCATTCCAAGTTGGCTTGGGAAACTTGAACAATTACAAGAACTTGACCTTTCTTATAATTATTTTTCTGGTCCAATCCCTGTAAGTTTAGGAAATCTATCATCCTTGATTACATTAATACTCGAGTCAAATGACTTGAATGGAAATCTTCCAGGGGAGCTCGGACAACTCTTCAACTTGGAAACTCTTCGGGTTTCAAAAAATTCCTTGACTGGGATTGTGTCTGAAAGAAATTTAGGTTCTTTAAGAAATTTAAAGAACTTTTCCATAAGTTCTCCCTCCCTGATCTTTGATTTTGGTCCTATCTGGGTCCCTCCTTTTCAACTTCTAAATATTGAATTGGGCAATTTGAAAGACAAACTTCCTTCATGGCTATTCACACAAAGCTCTCTAAAATATCTTACCATCAGAGACTCAACTGCTTCATTTGAACCGCTTGATATGTTTTGGAACTTTACTACTCAACTTGAGTCTATCTCTTTGGAAAACAACACAATCAACGGGGACATGTCAAATGTGTTTCTAAGTTCAAAAGTGGTTTGGTTAGTGGCCAATAATTTAAGAGGTGGCATGCCGCATATATCACCAGAAGTGGTTGTTTTACACTTACGTAATAACTCATTGTCAGGATCCATTTCTCCTCTCTTGTGTCACAATAATAAGAGGAAAAAAAGTAATTTAGTGTACTTGGACATGAGTTATAATAATTTATCCGGAGAACTCACAGACTGTTGGAATGATTGGAAATCATTGGTTCTTATTAATTTCAGATTCAACAACCTAACAGGCATGATTCCTCACTCCATGGGTTCTTTGTCTAACCTTCGTTTTCTGTATCTGAAAAGTAACAAGTTCTTCGGAAAGGTGCCCTTTTCACTAAGAAACTGCAAGAATCTTCGGATACTTGATCTATGTCGCAATAATCTTTCCGGGCTAATACCAAGTTGGTTAGGGCAAAATGTTGAAGGTCTTGAATTGAGATCCAATAAATTCAGTGGCAATATCCCCACACAGCTATGTAAACTTCAATCTTTAATGGTGATAAATTTGGCGAGTAATAAATTATCAGGACTAATACCCAGTTGTTTGCATAACATCACATCCATGCTTTCTAGTCATTTTGTAACTCGTAAATTCGACTTTACCCTTAATTATCCAGGTTTATCGGTATACATTTCTTGTAATGTTCCGATGCTTATAAAGGGAAACGAGTTACCATATGTTCATTTGATGAAAGCCATTGATCTCTCAAGCAATAACTTGTCTGGAAATGTGCCTCTACAGATATATATGCTCACTGGGTTACAGTCCTTGAATTTGTCCCATAATCAATTGATGGGAACGATACCAGAAGAGATTGGCAACTTGGAACAATTGGAGTCCATTGATCTTTCATCAAATAATTTCTCGGGAGAAATTCCTCAGTCCATGTCTGCCTTGCATTTTCTTGCTGTATTGAATCTGTCATTCAATAATTTTGCGGGCAAAATCCCAGCAGGGACCCAACTTGGTTCTACAAATCTTAGTTATATCGACAATCCTGACCTCTGTGGACCTCCACTTACAAAGATATGCCCCCAAGATGAAAAACCCCCCAATATAAAACCTATGGGAGGAGGTGATGATGACAAATCTGAGGTGTGTTCGTGGTTCTACATGGGACTAGGAGTTGGATTTGCCGTTGGATTTTGGGGAATATTGGGCACCGTTTTCTTCAACAGAAGATGCAGACATGCTTATTTTAGATTGTTGCACCGAATTTGCAAATTTGTTATCCAAAAGTTAAACTCCATTACTGAAATATAG 2622 0.3795 MSNSNIHCNKKDMNTLLSFKQGLTDPSHVLSSWVPNLDCCQWSGVKCDNITGRVTNLDLPCHTSHPKVVEFGEKDDKLHCLSGSFSLSLLELEYLSYLNLSNNNFKSMQYNSIGSQKCDDLPIGNLSHLCGNSSNLRYLDLSQNYDLLVDNLHWISHLTSLQYLNLGGVYLHMDIDWLQSVTMLPSLSELHLKRCKLENIYPFLQHANFTSLQVLNLADNDFISELPGWLFNLSDISHIDLSQTCLHSQLPDALPNLRSIKSLILSHNYLRGPIPSWLGKLEQLQELDLSYNYFSGPIPVSLGNLSSLITLILESNDLNGNLPGELGQLFNLETLRVSKNSLTGIVSERNLGSLRNLKNFSISSPSLIFDFGPIWVPPFQLLNIELGNLKDKLPSWLFTQSSLKYLTIRDSTASFEPLDMFWNFTTQLESISLENNTINGDMSNVFLSSKVVWLVANNLRGGMPHISPEVVVLHLRNNSLSGSISPLLCHNNKRKKSNLVYLDMSYNNLSGELTDCWNDWKSLVLINFRFNNLTGMIPHSMGSLSNLRFLYLKSNKFFGKVPFSLRNCKNLRILDLCRNNLSGLIPSWLGQNVEGLELRSNKFSGNIPTQLCKLQSLMVINLASNKLSGLIPSCLHNITSMLSSHFVTRKFDFTLNYPGLSVYISCNVPMLIKGNELPYVHLMKAIDLSSNNLSGNVPLQIYMLTGLQSLNLSHNQLMGTIPEEIGNLEQLESIDLSSNNFSGEIPQSMSALHFLAVLNLSFNNFAGKIPAGTQLGSTNLSYIDNPDLCGPPLTKICPQDEKPPNIKPMGGGDDDKSEVCSWFYMGLGVGFAVGFWGILGTVFFNRRCRHAYFRLLHRICKFVIQKLNSITEI 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00903 873 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 448 652 - -
Spst10g00903 873 Gene3D Ribonuclease Inhibitor 382 804 IPR032675 -
Spst10g00903 873 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 675 797 - -
Spst10g00903 873 Pfam Leucine rich repeat N-terminal domain 10 48 IPR013210 -
Spst10g00903 873 SUPERFAMILY RNI-like 318 512 - -
Spst10g00903 873 Gene3D Ribonuclease Inhibitor 8 204 IPR032675 -
Spst10g00903 873 PANTHER LRR RECEPTOR-LIKE KINASE 180 323 - -
Spst10g00903 873 Pfam Leucine rich repeat 259 318 IPR001611 GO:0005515
Spst10g00903 873 SUPERFAMILY RNI-like 473 784 - -
Spst10g00903 873 Gene3D Ribonuclease Inhibitor 205 381 IPR032675 -
Spst10g00903 873 PRINTS Leucine-rich repeat signature 704 717 - -
Spst10g00903 873 PRINTS Leucine-rich repeat signature 499 512 - -
Spst10g00903 873 Pfam Leucine Rich Repeat 570 589 IPR001611 GO:0005515
Spst10g00903 873 Pfam Leucine Rich Repeat 707 728 IPR001611 GO:0005515
Spst10g00903 873 SMART LRR_typ_2 209 233 IPR003591 -
Spst10g00903 873 SMART LRR_typ_2 92 115 IPR003591 -
Spst10g00903 873 SMART LRR_typ_2 568 591 IPR003591 -
Spst10g00903 873 SMART LRR_typ_2 329 354 IPR003591 -
Spst10g00903 873 SMART LRR_typ_2 184 206 IPR003591 -
Spst10g00903 873 SMART LRR_typ_2 728 752 IPR003591 -
Spst10g00903 873 SMART LRR_typ_2 704 727 IPR003591 -
Spst10g00903 873 SMART LRR_typ_2 281 305 IPR003591 -
Spst10g00903 873 SMART LRR_typ_2 614 637 IPR003591 -
Spst10g00903 873 FunFam Leucine-rich repeat receptor protein kinase EMS1 274 371 - -
Spst10g00903 873 SUPERFAMILY RNI-like 80 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00903 Spst-Chr10 9850573 9853194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00903 8 797 Receptor kinase-like Gene Family AT4G13920 30.796 2.87e-75 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00903 - - vun:114190782 1394.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00903 10 9850573 9853194 Spst10g00903 10 9850573 9853194 ECH