Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00872 ATGAGCAATCTAGTCTTGTCGAATCATATTGGTCAAGCCCTTGTAAGAAGTATGGGTGAAATTTTATTTTCATGTGGAAGTAATAAAAGGGCTGTTATTGCAACTTTAAGCATTCCAGAGAATGACATTCAGCGTTTTGAAGGGATTTCACAGGATGAGGTTATTGCAAAATCACTACAAGGTCTTTCCATTGAATCTGCCATGGATCTGCAGAAAGTTCTTAGAGTTGAAATGTGCTCATCACAAACGATTGCATTGCAACGACTGGAAGCAAATCTTCCCTTCTTCCAGAGTCGAATGGGGGCATTGCTTTTCCTAATCTCTGCTTTGCTTTCTCGAGGACTGGACTTGGTTCAAAGCGACAGGGATGATCCCAGCCTACCACTGGTTACTGCACCTTTTGGGCATGCCTCCCAGGAAATTGTGAACCTATTGCTATGTGGGGAGGCTGTCCCTAATGTGTTTGATGGAAGGATGGATTTAGGTGGAGGCATGTTTCTGAAAGGTATATCCCGAGATGTAGAAGTTGGATTTCTCACTCTATTAGAATCCCTGAATTTTTGCAAGGTTGGTCAGCATCTGAAATCCCCAAAATGGCCTATATGGGTTGTGGGGAGTGAATCCCATTACACTGTGCTGTTTGCTCTAGACCCCAGCGTCCAAAGCGAGAATGAACTGGAAGGAAGGGAAACTCAGATTCGCAAAGCTTTTGATGCACAGGATCAGAGTGGAGGTGGTGGTTTCATTAGTGTGGAAGGGTTCCATCAAGTCCTTAGAGAAACAGATATCAAATTTCCACCAGAGAAGCTGGAACATCTTTGCTCTGCAGGGTTCATTGTGTGGAGTGAATTCTGGCAAGTTATTTTAGATCTAGACAAAAGTTTAGGAGGTTTGAAGGATTCATCAGGATTGATGGGTAAGAAGGTCTTTGATCTATACCATTTTAATGGGATTGCTAAATCAGATCTGAATGGTAGTCAAATAAATTCTGCGGGTGAAATTCCACTGCAAAGACCCCGGCTCACAAAATTGAGAGTTTCAGTTCCCCCAAGGTGGACGCCTGAGGAATTTATGGCAGATGTTAAAGTTTCGTCTGCTCCTAGTGCAAGTGACTCTGCTGGGAAGGACAATGAGGTATCAAAACCGGAGCCTTCTCAGCATGCACCTTTGGTGGACTGCGTAAGAACACGCTGGGCCCGTGCTACCTGCAGCTGGTTTGGGGATCCTCCTAGTATAGTTTGA 1242 0.4428 MSNLVLSNHIGQALVRSMGEILFSCGSNKRAVIATLSIPENDIQRFEGISQDEVIAKSLQGLSIESAMDLQKVLRVEMCSSQTIALQRLEANLPFFQSRMGALLFLISALLSRGLDLVQSDRDDPSLPLVTAPFGHASQEIVNLLLCGEAVPNVFDGRMDLGGGMFLKGISRDVEVGFLTLLESLNFCKVGQHLKSPKWPIWVVGSESHYTVLFALDPSVQSENELEGRETQIRKAFDAQDQSGGGGFISVEGFHQVLRETDIKFPPEKLEHLCSAGFIVWSEFWQVILDLDKSLGGLKDSSGLMGKKVFDLYHFNGIAKSDLNGSQINSAGEIPLQRPRLTKLRVSVPPRWTPEEFMADVKVSSAPSASDSAGKDNEVSKPEPSQHAPLVDCVRTRWARATCSWFGDPPSIV 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00872 413 MobiDBLite consensus disorder prediction 362 387 - -
Spst10g00872 413 SMART DUF4205_3 2 283 IPR025257 -
Spst10g00872 413 Pfam Deubiquitinating enzyme MINDY-3/4, conserved domain 12 227 IPR025257 -
Spst10g00872 413 SUPERFAMILY EF-hand 229 289 IPR011992 -
Spst10g00872 413 PANTHER UNCHARACTERIZED 12 411 IPR039785 GO:0004843|GO:0071108|GO:1990380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00872 K22647 - gmx:100813222 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00872 10 9305174 9309500 Spst10g00872 10 9305174 9309500 ECH