Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00861 ATGGAGGTTGAGTTGGGGCTGAAGATCACAAGAACCAAAGATGATACCACTTCCGTTTCTGATTTTCAGTTTGCCAAAGACAGATTAGGACCTGTCTTCTTTTCTAAAGAAACTGATGCAAAGCTCATCCTCACTGCACATCTTAAAGGATATAAGAAAGAGGACATTGACATCAATATCAGTAAAGATGGCACTGAGATTTCGGTGAGTGGGGAGAAGGAGGTGCAGGAAATGCAAATGATACCATTCAAGAAAGAACTCAAAACCAAAGAGTTTGTGAAGAAGTTTAGAATCCCTGATGGGGTGGTTTTGGATCGGATCAAGGCGAAGTATAACGAAGTGGATGCAGTTTTGACAATAGTGATGCCAAAAATGGAAGTGGGAAAAGGAATGAGTGAAATCGAGGAGGTGCAGGAAGAAGCAGAGCCAATTGTGGCAGAAAATGTTGTAGATAGCGTGATAACAGAGCCAGAGGAAAGAGAGCCAGAAAAGGTTTCAGATAAGACTGAAGAGGAAACACCTCCAGTGAAGAAGCCCAAAAAACCCTGGACTCCTTGTCCTCCTTTCTATTTTGGAGGATCAACTTTGCTTGTAACTCTTCTACTTCTTGTGATGCACTATATTAGAGCTAGAAAGAGTTAA 642 0.4159 MEVELGLKITRTKDDTTSVSDFQFAKDRLGPVFFSKETDAKLILTAHLKGYKKEDIDINISKDGTEISVSGEKEVQEMQMIPFKKELKTKEFVKKFRIPDGVVLDRIKAKYNEVDAVLTIVMPKMEVGKGMSEIEEVQEEAEPIVAENVVDSVITEPEEREPEKVSDKTEEETPPVKKPKKPWTPCPPFYFGGSTLLVTLLLLVMHYIRARKS 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00861 213 Pfam Hsp20/alpha crystallin family 36 129 IPR002068 -
Spst10g00861 213 Gene3D - 9 135 IPR008978 -
Spst10g00861 213 SUPERFAMILY HSP20-like chaperones 31 129 IPR008978 -
Spst10g00861 213 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 23 140 IPR002068 -
Spst10g00861 213 PANTHER HEAT SHOCK PROTEIN 26 1 181 - -
Spst10g00861 213 MobiDBLite consensus disorder prediction 152 180 - -
Spst10g00861 213 MobiDBLite consensus disorder prediction 153 178 - -
Spst10g00861 213 CDD ACD_sHsps-like 36 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00861 Spst-Chr10 9203894 9204617 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00861 - - gmx:100799556 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03377 4 73923882 73931395 Spst10g00861 10 9203894 9204617 PCT