Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00742 ATGGGTGACAGAAGAAAGAAGCAGCATCGTCTGCAGGACTCATCCACTTCCTCGTCCTCTTCGTTGTCGGACTCCGACCACTCTTCGCGGCGGCGGAGACGGCGGCGCGAGAAGGAGCGGCGCAGAAGGAGTGAGGAGAAGGGGGAGCGAAGGAGGAAGAGGAGAGACAGAGAGAGGAAAAAGAAGAAGAGGCTCCACGATTCTGATTATTCCTCCAACTCTTCGGAGGATGAAGACGAACAACCTAGGGTTCAGCCTGAAACTGTTATAACGGAAATGATGAGAGAGTTCCCCAACGTCGGCAACGATTTGGAGCAGCTTTTGCAAATGATCGATAATGGGCAAGCTGTTGACATAAAGGGTATATCAGAACGATCTTTAGCAAAGCATTTGAAGAAGCTGTTTCTTTCGTTAAATCTTAAGGAGAATGGAGATAGGGTTTTCTTGCTGCGTTCTAAAGCTCGCCCTACTTTGGGTGTTCTTGGCCCTCTCATTCACTCCTACACGAATCCCATGAAGGAACAAGGGGAGGCTTCTGCACCGGTGCCTGAATCCAGTTCAGTTCCAGTGGATGTTGGAAATGAACAGATGGTGGGTGACCATGTGCCCGTAACTCCAGAAGATCATTCGGTTGGTCCTAGGAAAAGGATGATTGGCCCTGCAATGCCGTCAGCTGAATTACTGGCTGCTGCTGCCAAATTAACAGAGGCACAGACTGAGCTCAGAGAAGCCGAATTGGATGATGACAATGAACTATTTATAGGACCTCCACCAGCAGCTATGGTATCTGAAGCAGAATCAGCTAATGAAGCAGAACGTTTTGAAGAGGTGACCAGAATAATGGAAGTTGAGGCTGACAGCCCATATGATGTTCTAGGCGTCAATCATAATATGTCCAATGAAAATGTAAAGAAAAGGTACTGGAAGATATCATTATTGGTTCATCCAGATAAATGCTCTCATCCGCAAGCCCACCAGGCTTTTATTAAGTTAAATAAAGCTTTCAAAGAGTTACAAGATCCAGAAAAGGTGAGCCTGCTAGAAGGATGGAACTTGAATAGTGAATATTTTATTGACACATGGCTGAAGTCATTTGAAAAAGCCGATGTTATTAGCAATTTTCTTGCACTGGCCTATGTTATTGCTGACATTCACTGTCGGAAAGCAATGGATGAGAAAATCAAACTCAAGCAAGAACAAGAGGAATTTAAGGCTGAACTTAAAACCATGCGTGAGGCTGCACTGTGGAGAAGATCTCAAGGTGAGTTCCACTATGTAGAGGGTTTTGTCAAGGTTGTTCAGGTCACTTTTCTGGATGACATACTTAATTTGACAGTGAGTGATATGAACTTAACTTTGGTGAGGAAATCCGTGGCAGGTATTTCCATGGAGGGTGATGAGGAGCTTCTGGCACAGACAGAGGTTAAAGTGGAGCCAAAAAGGGATGAGTGGATGACAACACTGCCTCCAGAAAGGAAACCTGGTGGTATGACTATGCACTCAACCAAGTTTAGCCGGGGGCCAAAGGAAGGTAGAGGTGATACTAGTGTTTGGACCGACACCCCTTTGGACAGGGCCCAGAAAGCAAAGATGAATTATTTGGAGGCGTACAATGAAGCCACTGCTCTAGCTTCAAATGAAGAGGATAAGAAAAGGGCCAGTGCGGATGCAGAATTGGTGGACAAATACAATAAAGCAAAACGGTCAAAAACATTGGTCGAGAAGCATCAAGAAGAGGTTGCTAACAAATCCAAGAAAAAGTCCAAGCAAGTGAAGCAACAGCCAGAGAAGGAAGAGTGGGTGGGTCAACATCCATGGAAGCCATGGGACCGTGAAAAGGATCTGACTGCTGGAAGGAAAACTGTAAATTTTGATTCAGAAAGCATGACTAAGGGTTTATCTTCGAGGTTTTCTTCTGGAAACTTTCAGAGGAACTTCCTTTGA 1944 0.4532 MGDRRKKQHRLQDSSTSSSSSLSDSDHSSRRRRRRREKERRRRSEEKGERRRKRRDRERKKKKRLHDSDYSSNSSEDEDEQPRVQPETVITEMMREFPNVGNDLEQLLQMIDNGQAVDIKGISERSLAKHLKKLFLSLNLKENGDRVFLLRSKARPTLGVLGPLIHSYTNPMKEQGEASAPVPESSSVPVDVGNEQMVGDHVPVTPEDHSVGPRKRMIGPAMPSAELLAAAAKLTEAQTELREAELDDDNELFIGPPPAAMVSEAESANEAERFEEVTRIMEVEADSPYDVLGVNHNMSNENVKKRYWKISLLVHPDKCSHPQAHQAFIKLNKAFKELQDPEKVSLLEGWNLNSEYFIDTWLKSFEKADVISNFLALAYVIADIHCRKAMDEKIKLKQEQEEFKAELKTMREAALWRRSQGEFHYVEGFVKVVQVTFLDDILNLTVSDMNLTLVRKSVAGISMEGDEELLAQTEVKVEPKRDEWMTTLPPERKPGGMTMHSTKFSRGPKEGRGDTSVWTDTPLDRAQKAKMNYLEAYNEATALASNEEDKKRASADAELVDKYNKAKRSKTLVEKHQEEVANKSKKKSKQVKQQPEKEEWVGQHPWKPWDREKDLTAGRKTVNFDSESMTKGLSSRFSSGNFQRNFL 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00742 647 Pfam Protein of unknown function (DUF3752) 489 638 IPR022226 -
Spst10g00742 647 Coils Coil 523 543 - -
Spst10g00742 647 Coils Coil 386 413 - -
Spst10g00742 647 MobiDBLite consensus disorder prediction 1 84 - -
Spst10g00742 647 CDD DnaJ 288 340 IPR001623 -
Spst10g00742 647 MobiDBLite consensus disorder prediction 62 84 - -
Spst10g00742 647 Pfam DnaJ domain 288 343 IPR001623 -
Spst10g00742 647 ProSiteProfiles dnaJ domain profile. 287 343 IPR001623 -
Spst10g00742 647 Coils Coil 227 247 - -
Spst10g00742 647 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 6 422 - -
Spst10g00742 647 SUPERFAMILY Chaperone J-domain 254 343 IPR036869 -
Spst10g00742 647 PRINTS DnaJ domain signature 289 307 IPR001623 -
Spst10g00742 647 PRINTS DnaJ domain signature 307 322 IPR001623 -
Spst10g00742 647 PRINTS DnaJ domain signature 323 343 IPR001623 -
Spst10g00742 647 MobiDBLite consensus disorder prediction 568 620 - -
Spst10g00742 647 SMART dnaj_3 286 343 IPR001623 -
Spst10g00742 647 MobiDBLite consensus disorder prediction 568 647 - -
Spst10g00742 647 Gene3D DnaJ domain 260 346 IPR036869 -
Spst10g00742 647 MobiDBLite consensus disorder prediction 621 647 - -
Spst10g00742 647 MobiDBLite consensus disorder prediction 487 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00742 Spst-Chr10 7761321 7766752 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00742 - - gmx:100788598 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00742 10 7761321 7766752 Spst10g00742 10 7761321 7766752 ECH