Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00736 ATGGCTCACCTTCTCCACACCTCCTTCATCCCTTCCTCCCCCTCCCTCCGCCGCGCCCCCGTTCCCCACCGCAAAACGACGTCTCCCCTCGTCGTTCGGGCCAAGATCCGGGAGATTTTCATGCCGGCACTCAGCTCCACCATGACGGAGGGAAAAATCGTCTCCTGGACCAAATCCGAGGGCGACAAGCTCTCCAAGGGCGACAGCGTTGTTGTCGTAGAGTCTGACAAAGCCGACATGGACGTCGAGACCTTCTACGACGGCTACCTCGCCGCCATCGTCGTCGAGGAAGGCGCCGTCGCCGCCGTTGGATCCCCCATCGCATTCCTCGCCGAGACCGAGGACGAGATTCCTCAAGCCAAGTCCAAAGCCTCCTCTTCCGCATCCGCACCTGCACCTTCGCCAGCACCAGCACCAGCACCAGCACCGCCTGTGGAGTCTCAATCGGAAAAGGTTGCCGCGCCAGTCGCGGCAGCGGTTCCGGCTCCGGTTGTAATGTCCAGTCATCCTGCTTCGGAAGGAGGGAAGAGGATTGTTGCGTCACCTTATGCGAAGAAGCTCGCCAAGGATTTGAAGGTGGAGTTGGGGAGGATCGTGGGGACCGGACCGATGGGGAGGATTGTGGCTAAAGATGTCGAGGCATTTGCAGCAGCAGCGCCGCCAGCACCAGGGAAGAGTGCAGTGCCTGCCGGGGTGGAATTGGGATCTGTAGTGCCTTTCACTACAATGCAGAGTGCTGTGAGTAGAAACATGGTGGAGAGTTTGGCGGTTCCCACTTTCAGAGTTGGTTACACCATCACCACGGACGCACTTGATGCCTTGTACAAGAAGATCAAGTCAAAGGGAGTTACTATGACAGCATTGCTTGCCAAGGCTACTGCTCTTGCACTGGTCAAACACCCTGTTATCAACTCGAGTTGTAGAGATGGTAATAGCTTTACATATAATAGCAGCATCAATGTTGCAGTTGCTGTGGCTACAGATGGCGGATTGATTACACCAGTGCTTCAGAATGCTGATAAGGTTGATGTCTATTCATTGTCAAGAAAGTGGAAGGAGTTGGTCGATAAGGCCAGGGCCAAGCAGCTGCAACCTCATGAATACAACACTGGTACATTCACTCTTTCCAATCTGGGAATGTTTGGTGTTGATCGCTTTGATGCTATTCTGCCACCTGGAACTGGAGCAATAATGGCTGTTGGAGCATCACAGCCAACTGTTGTCGCTACCAAGGATGGTCGCATTGGCATGAAGAATCAAATGCAGGTCAATCTTACAGCTGATCATCGAGTCATCTATGGCGCTGATTTGGCTTCGTTCTTGCAAACACTTTCACAGATTATCGAGGACCCCAAAGATCTTACTTTTTAG 1371 0.5346 MAHLLHTSFIPSSPSLRRAPVPHRKTTSPLVVRAKIREIFMPALSSTMTEGKIVSWTKSEGDKLSKGDSVVVVESDKADMDVETFYDGYLAAIVVEEGAVAAVGSPIAFLAETEDEIPQAKSKASSSASAPAPSPAPAPAPAPPVESQSEKVAAPVAAAVPAPVVMSSHPASEGGKRIVASPYAKKLAKDLKVELGRIVGTGPMGRIVAKDVEAFAAAAPPAPGKSAVPAGVELGSVVPFTTMQSAVSRNMVESLAVPTFRVGYTITTDALDALYKKIKSKGVTMTALLAKATALALVKHPVINSSCRDGNSFTYNSSINVAVAVATDGGLITPVLQNADKVDVYSLSRKWKELVDKARAKQLQPHEYNTGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGASQPTVVATKDGRIGMKNQMQVNLTADHRVIYGADLASFLQTLSQIIEDPKDLTF 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00736 456 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 179 216 IPR004167 GO:0016746
Spst10g00736 456 SUPERFAMILY Single hybrid motif 35 130 IPR011053 -
Spst10g00736 456 Gene3D - 233 455 IPR023213 -
Spst10g00736 456 Gene3D - 167 218 IPR036625 GO:0016746
Spst10g00736 456 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 32 135 - -
Spst10g00736 456 Pfam e3 binding domain 178 213 IPR004167 GO:0016746
Spst10g00736 456 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 28 455 IPR045257 GO:0006086|GO:0045254
Spst10g00736 456 SUPERFAMILY CoA-dependent acyltransferases 237 454 - -
Spst10g00736 456 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 171 216 IPR036625 GO:0016746
Spst10g00736 456 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 237 454 IPR001078 GO:0016746
Spst10g00736 456 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 61 90 IPR003016 -
Spst10g00736 456 MobiDBLite consensus disorder prediction 118 150 - -
Spst10g00736 456 Pfam Biotin-requiring enzyme 38 108 IPR000089 -
Spst10g00736 456 FunFam Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex 173 220 - -
Spst10g00736 456 Gene3D - 32 135 - -
Spst10g00736 456 FunFam Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex 232 455 - -
Spst10g00736 456 ProSiteProfiles Biotinyl/lipoyl domain profile. 36 111 IPR000089 -
Spst10g00736 456 CDD lipoyl_domain 38 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00736 Spst-Chr10 7725682 7729988 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g00736 1 456 Acyl Lipid Metabolism Gene Families AT1G34430 76.344 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00736 K00627 - gmx:100799926 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00736 10 7725682 7729988 Spst10g00736 10 7725682 7729988 ECH