Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00735 ATGGGTGGTTCCATTTTCACTCACTTCCTCCTTCTACCTTCCTCTTCTTCTCCCTCTCTTTCCACTCTAGTTCCATCCAAATTCAATGAATCTGTTCCCTTCACCCTTTTCTGCAACCAATTCCCTTCCAAAGTCTCTACTTCCTCCCCTTCCCAATCCTCACCTCCTCGTCGTTACTCGTTTTCTGTAAAAAAGATAAATGCCATCGGAATTCAGCAAAAAGGTTCCATACGACATGGAGACAATCTTGATGCAATGAAGAGCAGGATTTTGCTGAAGAAGTTTCAAAGGAAAATGCCGACGGAATTCCTTAGTACCCTTTTCAACAAACAATTTATAATTGATCTTCAAGCTGCTCAATGTGTTAACCATGGATTTGGGGTTGGTTACCCTCTTAATTTAAGTGTACAAACTACAATGGGCCAAACAATTGGAATGGACTTAATTGTTCAATGCTATTTGACAGTTGTAGGATTTTCAGTGAATGACTTTACAACCAAAGATATTGAAGATGGGGAAAGATCATCCAAATGGGTTTTAGCATTCTTGTTTGGACAAACTATATCAGTGATTTCTCCTGATGTTTCATATGCAAGCAGCTCAATGAAGATAAATGAGATATATGAGGTTGGAGAATTGTTTGATTTAAGCATCCAACTAATATACTTGTTATTGCTATTGAGTTTGCTAGGGACTGGAACATTTTTTGTGATTCGCCAAGTTCTTGTACGCAGAGAACTCGACCTATCAGCCAAAGAGTTGCAGGAGCAAGTCAGAAGTGGTGATGCAGGTGCAACTGAGCTTTTTGAACTTGGTGCAGTGATGCTGCGCAGGAAATTTTACCCTGCTGCTACCAAGTTCTTGCTTCAAGCAATTGAGAAATGGGACGGGGATAATCCGGATCTTGCTCAGGTTTACAACGCTCTTGGTGTAAGCTATGTCCGTGATGGGAAAGTTGACAAGGGAATAGCTCAGTTTGAAACAGCTGTCAAGCTTCAACCAGGCTATGTCACAGCTTGGAACAATCTTGGAGATGCCTATGACAGTAAAAAAGATTACAAGTCTGCTTTGAAGGCATTTGAAGAAGTCCTACTATTTGATCCTAACAACAAGGTTGCACGGCCTAGGAGAGATTTATTGAAGGAACTTGTTCAAGCATCCGAAGGAGTTACTGTCACCAAATCAACAGACAAGAAATGA 1200 0.4075 MGGSIFTHFLLLPSSSSPSLSTLVPSKFNESVPFTLFCNQFPSKVSTSSPSQSSPPRRYSFSVKKINAIGIQQKGSIRHGDNLDAMKSRILLKKFQRKMPTEFLSTLFNKQFIIDLQAAQCVNHGFGVGYPLNLSVQTTMGQTIGMDLIVQCYLTVVGFSVNDFTTKDIEDGERSSKWVLAFLFGQTISVISPDVSYASSSMKINEIYEVGELFDLSIQLIYLLLLLSLLGTGTFFVIRQVLVRRELDLSAKELQEQVRSGDAGATELFELGAVMLRRKFYPAATKFLLQAIEKWDGDNPDLAQVYNALGVSYVRDGKVDKGIAQFETAVKLQPGYVTAWNNLGDAYDSKKDYKSALKAFEEVLLFDPNNKVARPRRDLLKELVQASEGVTVTKSTDKK 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00735 399 SMART tpr_5 337 370 IPR019734 GO:0005515
Spst10g00735 399 SMART tpr_5 303 336 IPR019734 GO:0005515
Spst10g00735 399 Pfam Tetratricopeptide repeat 308 367 - -
Spst10g00735 399 SUPERFAMILY TPR-like 265 375 IPR011990 GO:0005515
Spst10g00735 399 ProSiteProfiles TPR repeat profile. 337 370 IPR019734 GO:0005515
Spst10g00735 399 Gene3D Tetratricopeptide repeat domain 258 398 IPR011990 GO:0005515
Spst10g00735 399 ProSiteProfiles TPR repeat region circular profile. 337 370 - -
Spst10g00735 399 ProSiteProfiles TPR repeat profile. 303 336 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00735 - - gmx:100800455 418.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00735 10 7719863 7723477 Spst10g00735 10 7719863 7723477 ECH