Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g00619 ATGATAGTCAGGTTAGGGGTCATAGTTGCTGCTTCCATTGCGGCCCTCACAGTTAAGCAGCTGAATGTGAATAACTCAAGATCAGAACATGGTGAAGCAAGGTTTAAAAAACATCAAGATGTGGGTACAGAACAGGAGCAGGTCACTTGTTCTACTGATGGTCATACCGAGAAGGTTGATTTGTCACTGTTGCAGAGGGAAGCAGAAGAAGAGGAGGTTAAGTTAAATAACAGCATAATCAATCAAACTGATGATTCTGAAAATGATATTCCACCTGAACTTGAAAGCCTTCTATCTGGGGAGATTGATTTTCCATCACTTGCTGAGAAGACTGATGAGGAGAAGAAAGACGGAGTTTATGAAACAGAATTGGCTAACAATGCGAGTGAATTAGACCGGTTGCGAAATCTAGTAAAGGAATTGGAGGAGAGGGAAGTGAAAATTGAAGGCGAATTACTTGAGTATTATGGTTTGAAGGAGCAGGAAGCAGACTTTGTGGAGTTGCAAAGGCAGTTGGAAATTAAGACTGTAGAAATAGATATGCTTAAAATGACCATTAATTCCTTGCAGGAAGAGAGGAACAAGCTTCAAGAAGAGCTCACACATGGAGCTTCTGCGGTGAGGGAACTTGAGGCAGCAAGAAGCAAGATTAAGGAACTGCGAAGGCAGATACAGCTTGAGGCTAACCAGGCAAAAACCCAGTTGTTGTTGCTTAAACAAAAAGTTTCTGGTCTAGTGATGAAAGAAGAAGGGGCTGCCAAGAAAGATATTGAAATTGGAAAGAAATTGAAAGCTCTGAATGACTTGGAGGTTGAAGTTGTGGAGCTTAAGAGAGAAAATAAAGAACTTCAACATGAGAAGCGAGAATTAACAGTTAAACTCAATGCTGCTGAATCTAGAATTACAGAACTCTCTAATGTGACAGAGAGTGAAATGGTTGCCAAGGCAAAAGAGGTAAGTAGCCTGAGGCATGTGAATGAAGACTTGCTAAAGCAAGTAGAAGGACTCCAGATTAATAGGTTTAGTGAAGTGGAAGAGCTCGTATATCTTCGTTGGGTCAATGCATGCTTAAGGTATGAGCTGAAGAATTTCCAGGCACCACCGGGAAAATTATCAACCCGTGATCTAAACACAAGTCTCAGCCCAAAATCGCAAGAGAAGGCTAAGCAATTAATGTTAGAATATGCGGGATCAGAGCACGGACAAGGTGACACAGATCTTGATAGCTACTTCTCTCATACCTCTTCACCAGGGAGTGAAGATTTTGACAATGCTTCTTCCATTGATAGCTTAATGAGTAAACATAGTATTGTTAGCAAGAAAACTAGTTTAATCCAAAAGTTGAAGAAATGGGGTAAAAGCAAAGATGATACAAGTGCTCTTTCATATCCAGCAAGATATCTTTCAGGTGGCTCTCCTAGCAGGATGAATATGAGTAACAGACCCAGGGATTCCCTGGAATCCTTGATGCAAAGGAATGCTGGTGATTCTGTAACCATCACTACCTTTGGACTGAAAGATCAGGAACCTACTATTTCTCCTGAAACTTCAGCTCTTCCTAGCATAAGAAGAGTTTCGTCCAGTGAATCCTTAAATTCTGTTGCAGCTTCATTCCAATTGATGCCTAAGACAGTTGTTGGGTATCTAGATGAAAAATATCCTGCTTATAAAGACCGCCATAGATTGGCCTTGGGAAGGGAGAAACAAATTAAGGAAAAGGCTGAGAAGGCAAGAGCGCAAAAGTTTGGTGATAATTCAAATTTGAATATGACAAAGGCTGAAAGAAACAGGACAATATCTTTGCCATCAAAACTAACTCAATTAAAGGAGAAGGAATATGTTTCTGGTAGTCCAAATGATCATCCTGACGATGCTAAGAATGTTGATAGTCAAACCATTAGCAAGATGAACCTTGTTCACATTGAGAAAAGGGCACCTAGGGTGCCTCAGCCACCTCCTAAACCATCTGATGGTGCTCCTCTTAGTACAGATTCAAATCCTTTAAATGAAGTATCATGTCCTCCAATTGTGCTTCCTCCTCCTCCTTCACCCGCAGCAGCACCACCAGGTGGATCACTTCCCACTCCACTGGGAAGTCTATCAAGAGGAGCATTAGCTGGTGATGAGGTTCACCATGCTCCTGAGCTAGTTGAATTCTATCAAACACTGATGAAACAGGAGGCAAAGAATGATACTTCACCATTAATTTCTTCAACATCTGATGCTAGGAGCGACATGATTGGAGAGATTGAGAACAGATCATCATTCTTCTTAGCTGTGAAAACCGATGTGGAAACTCAGGGTGACTTTGTCATGTCCTTGGCAACTGAAGTTCGTGCAGCTTCCTTCTATAAGATTGAAGATCTAGTGGCTTTTGTGAACTGGCTAGATGAGGAACTTTCCTTCTTGATCGATGAACGAGCTGTTCTCAAGCACTTTGATTGGCCAGACGGCAAAACAGACGTGCTGAGGGAGGCAGCTTTTGAATATCTGGATCTGATGAAATTGGAGAAGAAAGTCTCCACCTTCACTGATGATCCCAAACTCCCATGTGAAGCTGCTTTGCAAAAAATGTACTCATTGCTTGAAAAAGTAGAGCAAAGCATACATGCACTTTTACGGACAAGAGATATGGCTATTTCGCGGTACAAAGAGTTTGGAATACCAATAACTTGGCTATTAGATACGGGACTTATGGGAAAGATCAAGCTTTCCTCTGTGCAACTGGCAAACAAGTACATGAAACGTGTTGCATCTGAACTTGATACATTATCTGGACCGGACAAGGAACCAACCAGAGAGTTTTTGATCCTGCAAGGAGTACGTTTTGCTTTTCGTGTTCATCAGTTTGCAGGAGGTTTCGATACAGAGAGCATGAATGCTTTTGAAGAACTAAGGAGCCGTATCGGTGCTCCAGCAGGTGAAGATAGTAACCAGAAACATACATGA 2949 0.4168 MIVRLGVIVAASIAALTVKQLNVNNSRSEHGEARFKKHQDVGTEQEQVTCSTDGHTEKVDLSLLQREAEEEEVKLNNSIINQTDDSENDIPPELESLLSGEIDFPSLAEKTDEEKKDGVYETELANNASELDRLRNLVKELEEREVKIEGELLEYYGLKEQEADFVELQRQLEIKTVEIDMLKMTINSLQEERNKLQEELTHGASAVRELEAARSKIKELRRQIQLEANQAKTQLLLLKQKVSGLVMKEEGAAKKDIEIGKKLKALNDLEVEVVELKRENKELQHEKRELTVKLNAAESRITELSNVTESEMVAKAKEVSSLRHVNEDLLKQVEGLQINRFSEVEELVYLRWVNACLRYELKNFQAPPGKLSTRDLNTSLSPKSQEKAKQLMLEYAGSEHGQGDTDLDSYFSHTSSPGSEDFDNASSIDSLMSKHSIVSKKTSLIQKLKKWGKSKDDTSALSYPARYLSGGSPSRMNMSNRPRDSLESLMQRNAGDSVTITTFGLKDQEPTISPETSALPSIRRVSSSESLNSVAASFQLMPKTVVGYLDEKYPAYKDRHRLALGREKQIKEKAEKARAQKFGDNSNLNMTKAERNRTISLPSKLTQLKEKEYVSGSPNDHPDDAKNVDSQTISKMNLVHIEKRAPRVPQPPPKPSDGAPLSTDSNPLNEVSCPPIVLPPPPSPAAAPPGGSLPTPLGSLSRGALAGDEVHHAPELVEFYQTLMKQEAKNDTSPLISSTSDARSDMIGEIENRSSFFLAVKTDVETQGDFVMSLATEVRAASFYKIEDLVAFVNWLDEELSFLIDERAVLKHFDWPDGKTDVLREAAFEYLDLMKLEKKVSTFTDDPKLPCEAALQKMYSLLEKVEQSIHALLRTRDMAISRYKEFGIPITWLLDTGLMGKIKLSSVQLANKYMKRVASELDTLSGPDKEPTREFLILQGVRFAFRVHQFAGGFDTESMNAFEELRSRIGAPAGEDSNQKHT 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g00619 982 Coils Coil 259 307 - -
Spst10g00619 982 MobiDBLite consensus disorder prediction 29 43 - -
Spst10g00619 982 MobiDBLite consensus disorder prediction 582 607 - -
Spst10g00619 982 Coils Coil 124 151 - -
Spst10g00619 982 Coils Coil 61 81 - -
Spst10g00619 982 MobiDBLite consensus disorder prediction 673 691 - -
Spst10g00619 982 MobiDBLite consensus disorder prediction 368 426 - -
Spst10g00619 982 MobiDBLite consensus disorder prediction 643 699 - -
Spst10g00619 982 Coils Coil 158 241 - -
Spst10g00619 982 MobiDBLite consensus disorder prediction 405 426 - -
Spst10g00619 982 MobiDBLite consensus disorder prediction 26 54 - -
Spst10g00619 982 MobiDBLite consensus disorder prediction 575 607 - -
Spst10g00619 982 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 522 971 IPR040265 -
Spst10g00619 982 MobiDBLite consensus disorder prediction 370 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g00619 Spst-Chr10 6249877 6260980 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g00619 - - gmx:100785291 1532.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g00619 10 6249877 6260980 Spst10g00619 10 6249877 6260980 ECH